Information on SUBCLASS 3.6.1 |
Subclass Accession number: 7847
Subclass: 3.6.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 16 Average sequence ID (%) : 11.7 +/- 15.2 Average RMSD (Å) : 0.738 +/- 0.263 Consensus geometry
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Consensus Sequence: | XXhppXh |
(φψ)-conformation: | bbeaabb |
Pattern: | x | x | x | [degr] | [deknrsty] | [DEHKNQRTY] | x | [acfgivy] | [cfiklmtv] | [afilvy] |
Conservation: | -1.064 | -0.718 | -0.585 | 1.824 | 0.346 | 1.163 | -0.906 | -0.680 | -0.297 | 0.917 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b1i_A_62 | 1b1i | A | 63 | 72 | NPHRENLRIS | EEETTTEEEE | bwbeaabbbx |
1bag_*_361 | 1bag | - | 364 | 373 | NQRGSHGVVL | EEETTTEEEE | bbxeaabbbb |
1bdg_*_158 | 1bdg | - | 159 | 168 | VQKGLTHATL | EEETTTEEEE | xxbeaabbbx |
1eg7_A_1033 | 1eg7 | A | 1034 | 1043 | ELYGKYKAKI | EESSSS-EEE | bxbeaabbbb |
1gxy_A_196 | 1gxy | A | 202 | 211 | RTQGYNEIFL | EEETTTEEEE | bxbeaabbbb |
1h3f_A_416 | 1h3f | A | 418 | 427 | LQRGKDRFVR | EEETTTEEEE | bbbeaabbbb |
1hkx_A_410 | 1hkx | A | 420 | 429 | HLMGDESACI | EE-SSSEEEE | bxbeaabbbb |
1hx0_A_416 | 1hx0 | A | 419 | 428 | FGRGNRGFIV | EEETTTEEEE | bbbeaabbbb |
1jae_*_392 | 1jae | - | 395 | 404 | FSRGSQGFVA | EEETTTEEEE | bbbeaabbbb |
1k3b_A_57 | 1k3b | A | 61 | 70 | TIIYNQGFEI | EEETTTEEEE | bxbeaabbbb |
1kyq_A_152 | 1kyq | A | 154 | 163 | LEIGDRLQIL | EEETTTEEEE | bbbeaabbbb |
1nnj_A_58 | 1nnj | A | 61 | 70 | FEIGDDFRLI | EEETTTEEEE | xbbeaabbxx |
1ohv_A_437 | 1ohv | A | 437 | 446 | GGCGDKSIRF | EEETTTEEEE | bbbeaaxbbb |
1qci_A_73 | 1qci | A | 78 | 87 | DPFETNKCRY | EEETTTEEEE | bwbeaaxbxb |
1qh5_A_2 | 1qh5 | A | 6 | 15 | LPALTDNYMY | EEETTTEEEE | bwbeaaxbbb |
1ryp_G_67 | 1ryp | G | 67 | 76 | QVVDRHIGCV | EEETTTEEEE | bbbeaabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1hkx_A_410 | 1hkx | A | TBRHEXATANTALUM DODECABROMIDE | L - 421 |
1hkx_A_410 | 1hkx | A | TBRHEXATANTALUM DODECABROMIDE | M - 422 |
1hkx_A_410 | 1hkx | A | TBRHEXATANTALUM DODECABROMIDE | G - 423 |
1hkx_A_410 | 1hkx | A | DTT2,3-DIHYDROXY-1,4-DITHIOBUTANE | D - 424 |
1hkx_A_410 | 1hkx | A | TBRHEXATANTALUM DODECABROMIDE | D - 424 |
1k3b_A_57 | 1k3b | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 64 |
1k3b_A_57 | 1k3b | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 65 |
1kyq_A_152 | 1kyq | A | MSESELENOMETHIONINE | D - 158 |
1kyq_A_152 | 1kyq | A | MSESELENOMETHIONINE | R - 159 |
1nnj_A_58 | 1nnj | A | CRYPROPANE-1,2,3-TRIOL | Y - 58 |
1nnj_A_58 | 1nnj | A | CRYPROPANE-1,2,3-TRIOL | H - 72 |
1qci_A_73 | 1qci | A | ADEADENINE | V - 73 |
1qci_A_73 | 1qci | A | ADEADENINE | M - 74 |
1qci_A_73 | 1qci | A | ADEADENINE | G - 75 |
1qh5_A_2 | 1qh5 | A | ZNZINC ION | N - 12 |
1qh5_A_2 | 1qh5 | A | GTTGLUTATHIONE | N - 12 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hkx_A_410 | 1hkx | A | AC1DTT BINDING SITE FOR CHAIN A | D - 424 |
Clusters included in this Subclass |
CLUSTER: HA.4.16 |