Information on SUBCLASS 9.6.1 |
Subclass Accession number: 8026
Subclass: 9.6.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 51.0 +/- 20.7 Average RMSD (Å) : 0.200 +/- 0.082 Consensus geometry
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Consensus Sequence: | pShSXHcYDXhDh |
(φψ)-conformation: | pbapaalabpaba |
Pattern: | [F] | [AKRS] | [AS] | [IP] | [ST] | x | [H] | [GK] | [Y] | [D] | [TV] | x | [D] | [FY] | [FLMY] | [AES] | [FIV] |
Conservation: | 1.102 | -0.989 | -0.334 | -0.684 | -0.284 | -0.800 | 1.960 | -0.682 | 1.531 | 1.102 | -0.403 | -1.110 | 1.102 | 0.658 | -0.721 | -0.845 | -0.603 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j0h_A_199 | 1j0h | A | 199 | 215 | FRSPSNHKYDTADYFEV | EE-SSSS--S-SEEEEE | xpbaxaavabxabaabx |
1ji1_A_215 | 1ji1 | A | 215 | 231 | FKAPTNHKYDTQDYMAV | EE-SSSS--S-SEEEEE | xpbaxaavabpabaabx |
1ji2_A_196 | 1ji2 | A | 196 | 212 | FASPSHHKYDTADYLAI | EE-SSSS--S-SEEEEE | xpbaxaavabpabaabx |
1lwj_A_46 | 1lwj | A | 46 | 62 | FSSISFHGYDVVDFYSF | EE-SSSS--S-SEEEEE | xxbaxaalabxabaabx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lwj_A_46 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | H - 52 |
1lwj_A_46 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | Y - 54 |
1lwj_A_46 | 1lwj | A | ACGMODIFIED ACARBOSE PENTASACCHARIDE | D - 55 |
Clusters included in this Subclass |
CLUSTER: HA.9.9 |