Information on SUBCLASS 14.1.1 |
Subclass Accession number: 8048
Subclass: 14.1.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 58.7 +/- 22.0 Average RMSD (Å) : 0.250 +/- 0.105 Consensus geometry
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Consensus Sequence: | VhhpHPphphFppLXLKW |
(φψ)-conformation: | bppbbaapaaaaaalpbb |
Pattern: | [E] | [V] | [APT] | [ILM] | [ERT] | [H] | [NP] | [DHKT] | [FILY] | [DEP] | [aw] | [FL] | [AKQRS] | [ADEK] | [L] | [EGN] | [L] | [KR] | [W] | [Y] |
Conservation: | 0.596 | 0.217 | -0.563 | -0.338 | -0.739 | 1.734 | -0.174 | -1.051 | -0.596 | -0.482 | -0.731 | -0.096 | -0.898 | -0.874 | 0.217 | -0.770 | 0.217 | 0.104 | 2.872 | 1.355 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d0c_A_314 | 1d0c | A | 314 | 333 | EVPLEHPTLEWFAALGLRWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaavxbbx |
1jwk_A_322 | 1jwk | A | 322 | 341 | EVTMEHPKYEWFQELGLKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaavxbbx |
1m7v_A_190 | 1m7v | A | 190 | 209 | EVPITHPDIEAFSDLELKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaalxbbx |
1mjt_A_181 | 1mjt | A | 181 | 200 | EVPIEHNHYPKLRKLNLKWY | EEE---TT-GGGGGG--EEE | bbxxbbaabaaaaaalxbbx |
1om4_A_543 | 1om4 | A | 543 | 562 | EVPIRHPKFDWFKDLGLKWY | EEE---SS-TTGGGG--EEE | bbxxbxaNxaaaaaavxbbx |
4nos_A_328 | 4nos | A | 328 | 347 | EVAMEHPKYEWFRELELKWY | EEE---SS-GGGGGG--EEE | bbxxbbaaxaaaaaalbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d0c_A_314 | 1d0c | A | CADCACODYLIC ACID | W - 324 |
1d0c_A_314 | 1d0c | A | CADCACODYLIC ACID | L - 328 |
1d0c_A_314 | 1d0c | A | ACTACETATE ION | W - 332 |
1d0c_A_314 | 1d0c | A | ACTACETATE ION | Y - 333 |
1jwk_A_322 | 1jwk | A | EGLETHYLENE GLYCOL | P - 328 |
1m7v_A_190 | 1m7v | A | ARGARGININE | W - 208 |
1m7v_A_190 | 1m7v | A | ARGARGININE | Y - 209 |
1om4_A_543 | 1om4 | A | ARGARGININE | W - 561 |
1om4_A_543 | 1om4 | A | ARGARGININE | Y - 562 |
Clusters included in this Subclass |
CLUSTER: HA.13.3 |