Information on SUBCLASS 0.1.13 |
Subclass Accession number: 8075
Subclass: 0.1.13 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 17.2 +/- 16.9 Average RMSD (Å) : 0.487 +/- 0.217 Consensus geometry
|
Consensus Sequence: | pXhX |
(φψ)-conformation: | aabb |
Pattern: | x | [cdnpst] | x | [AILMT] | [deknr] | [dekqrt] | [ILVW] | x | [ADNQRS] | [EHKNS] | [HNY] | [PS] | [DEKNQS] | x | [FLV] | [gkrs] | [FKLTV] |
Conservation: | -1.123 | -0.634 | -0.709 | 0.186 | -0.434 | -0.566 | 0.528 | -0.778 | -0.453 | 0.468 | 2.247 | 2.194 | 0.425 | -0.817 | 0.696 | -0.498 | -0.733 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ex7_A_14 | 1ex7 | A | 15 | 31 | STLLKKLFAEYPDSFGF | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbx |
1gyt_A_200 | 1gyt | A | 204 | 220 | ASQARQLADSYSKNVIT | HHHHHHHHHHTTTTEEE | aaaaaaaaaaaaaabbb |
1i7p_A_218 | 1i7p | A | 218 | 234 | RPELEELRNEHSSRFKL | HHHHHHHHHH-GGGEEE | aaaaaaaaaaaaaabbb |
1jvs_A_11 | 1jvs | A | 13 | 29 | GCSTLDVVRHNPEHFRV | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbx |
1m4l_A_15 | 1m4l | A | 19 | 35 | YDFMDLLVAEHPQLVSK | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbb |
1obr_*_12 | 1obr | - | 16 | 32 | VNKINTVASNYPNIVKK | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbx |
1ogi_A_202 | 1ogi | A | 202 | 218 | KEELEEIQQKYPDNFRL | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbb |
2cnd_*_184 | 2cnd | - | 184 | 200 | RDELDRWAAEYPDRLKV | HHHHHHHHHH-TTTEEE | aaaaaaaaaaaaaabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ex7_A_14 | 1ex7 | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | K - 14 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | S - 11 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | I - 12 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | I - 12 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | G - 13 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | G - 13 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | S - 15 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | T - 16 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 19 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 20 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | F - 27 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | A - 31 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | L - 32 |
1jvs_A_11 | 1jvs | A | MSESELENOMETHIONINE | V - 33 |
1jvs_A_11 | 1jvs | A | NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 33 |
1obr_*_12 | 1obr | * | CACALCIUM ION | E - 14 |
Clusters included in this Subclass |
CLUSTER: HE.3.55 |
CLUSTER: HE.5.128 |