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Information on SUBCLASS 0.1.13
Subclass Accession number: 8075
Subclass: 0.1.13 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 8

Average sequence ID (%) : 17.2 +/- 16.9
Average RMSD (Å) : 0.487 +/- 0.217

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: pXhX
(φψ)-conformation: aabb
Pattern: x[cdnpst]x[AILMT][deknr][dekqrt][ILVW]x[ADNQRS][EHKNS][HNY][PS][DEKNQS]x[FLV][gkrs][FKLTV]
Conservation:-1.123-0.634-0.7090.186-0.434-0.5660.528-0.778-0.4530.4682.2472.1940.425-0.8170.696-0.498-0.733
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ex7_A_141ex7   A1531STLLKKLFAEYPDSFGFHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbx
1gyt_A_2001gyt   A204220ASQARQLADSYSKNVITHHHHHHHHHHTTTTEEEaaaaaaaaaaaaaabbb
1i7p_A_2181i7p   A218234RPELEELRNEHSSRFKLHHHHHHHHHH-GGGEEEaaaaaaaaaaaaaabbb
1jvs_A_111jvs   A1329GCSTLDVVRHNPEHFRVHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbx
1m4l_A_151m4l   A1935YDFMDLLVAEHPQLVSKHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbb
1obr_*_121obr   -1632VNKINTVASNYPNIVKKHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbx
1ogi_A_2021ogi   A202218KEELEEIQQKYPDNFRLHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbb
2cnd_*_1842cnd   -184200RDELDRWAAEYPDRLKVHHHHHHHHHH-TTTEEEaaaaaaaaaaaaaabbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ex7_A_141ex7   A     5GPGUANOSINE-5'-MONOPHOSPHATE K - 14
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 11
1jvs_A_111jvs   A     MSESELENOMETHIONINE I - 12
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 12
1jvs_A_111jvs   A     MSESELENOMETHIONINE G - 13
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 13
1jvs_A_111jvs   A     MSESELENOMETHIONINE S - 15
1jvs_A_111jvs   A     MSESELENOMETHIONINE T - 16
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 19
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 20
1jvs_A_111jvs   A     MSESELENOMETHIONINE F - 27
1jvs_A_111jvs   A     MSESELENOMETHIONINE A - 31
1jvs_A_111jvs   A     MSESELENOMETHIONINE L - 32
1jvs_A_111jvs   A     MSESELENOMETHIONINE V - 33
1jvs_A_111jvs   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE V - 33
1obr_*_121obr   *     CACALCIUM ION E - 14

Clusters included in this Subclass
CLUSTER: HE.3.55
CLUSTER: HE.5.128