Information on SUBCLASS 1.4.1 |
Subclass Accession number: 8185
Subclass: 1.4.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 23.9 +/- 21.8 Average RMSD (Å) : 0.383 +/- 0.098 Consensus geometry
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Consensus Sequence: | hpXLX |
(φψ)-conformation: | aaapp |
Pattern: | [DEKQT] | [aekn] | [AFILV] | [ailv] | [DNRS] | x | [LV] | [ADGKR] | [KPST] | [DGN] | [AG] | x | [LM] | [ILVY] | [FILV] | [fipv] | [hv] |
Conservation: | -0.174 | -1.040 | -0.315 | -0.739 | -0.094 | -0.427 | 1.330 | -0.844 | -0.021 | 0.839 | 2.030 | -1.108 | 1.639 | 0.302 | 0.644 | -1.386 | -0.635 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1g38_A_142 | 1g38 | A | 148 | 164 | EKAVRLLKPGGVLVFVV | HHHHHHEEEEEEEEEEE | aaaaaaxxpvpbbbbbb |
1g60_A_46 | 1g60 | A | 58 | 74 | DKVLDKLDKDGSLYIFN | HHHHHHEEEEEEEEEEE | aaaaaaxxaaxbbbbxb |
1i1n_A_166 | 1i1n | A | 166 | 182 | QALIDQLKPGGRLILPV | HHHHHTEEEEEEEEEEE | aaaaaaxxxvxbbbbwb |
1jqe_A_151 | 1jqe | A | 156 | 172 | KFFHSLLGTNAKMLIIV | HHHHHTEEEEEEEEEEE | aaaaaaxxxvxbbbbbb |
1r18_A_172 | 1r18 | A | 172 | 188 | TELINQLASGGRLIVPV | HHHHHTEEEEEEEEEEE | aaaaaaxxxvxbbbbwb |
1xva_A_151 | 1xva | A | 158 | 174 | KNIASMVRPGGLLVIDH | HHHHHTEEEEEEEEEEE | aaaaaaxxpvxbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g38_A_142 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | L - 142 |
1g38_A_142 | 1g38 | A | NEA5'-DEOXY-5'-[2-(AMINO)ETHYLTHIO]ADENOSINE | F - 146 |
1g60_A_46 | 1g60 | A | SAMS-ADENOSYLMETHIONINE | F - 52 |
1jqe_A_151 | 1jqe | A | QUNQUINACRINE | V - 173 |
1xva_A_151 | 1xva | A | SAMS-ADENOSYLMETHIONINE | R - 175 |
Clusters included in this Subclass |
CLUSTER: HE.1.29 |