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Information on SUBCLASS 2.7.1
Subclass Accession number: 8271
Subclass: 2.7.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 20

Average sequence ID (%) : 13.2 +/- 17.4
Average RMSD (Å) : 0.685 +/- 0.203

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 135-180 rho (°): 225-270
Consensus Sequence: XXXXXX
(φψ)-conformation: aabpbb
Pattern: [acfilmw][acfgikmtv][adeknqst]xx[dehnpr][ciltv]xx
Conservation:-0.691-0.3920.413-0.705-0.9502.0651.087-0.347-0.480
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bt4_A_1021bt4   A111119AKLIGDTHVHHHHS-EEEaaaabxbbx
1ci0_A_951ci0   A99107DIATNPNAAHHHH--EEEaaaabxbbb
1ckm_A_1961ckm   A206214ANAIYHTDGHHHHS-EEEaaaabxbae
1e5x_A_2471e5x   A251259ITAELPIYLHHHHS-EEEaaaabxbxx
1gq6_A_741gq6   A7482TFDLINCVDHHHHS-EEEaaaabxbbx
1gx3_A_2031gx3   A203211HFVTGLTVAHHHHS-EEEaaaabbbbb
1hd7_A_1821hd7   A199207LASRKPLVLHHHHS-EEEaaaabwbbb
1iwd_A_1171iwd   A123131AVASQPVSVHHHHS-EEEaaaabxbxb
1iyx_A_2671iyx   A277285LVSKYPIISHHHHS-EEEaaaabwxab
1j7g_A_991j7g   A113121CAEKLPVSTHHTTS-EEEaaaabwbbb
1kht_A_641kht   A8189MAKESPVAVHHTTS-EEEaaaabxbbx
1mmq_*_1271mmq   -141149WGKEIPLHFHHHHSS-EEaaaabxbbb
1one_A_2751one   A285293LMKRYPIVSHHHHS-EEEaaaabwxab
1pdz_*_2741pdz   -284292FCKDFPIVSHHHHS-EEEaaaabwxab
1poi_B_1381poi   B141149IATYSNTIIHHHHS-EEEaaaabxbbx
1ppo_*_1181ppo   -124132AIAKQPVSVHHHHS-EEEaaaabpbxb
1q16_A_9961q16   A9981005DIQAQPRK.HHHHS-EE.aaaabpbx.
1uqu_A_1871uqu   A197205LSNLTRVTTHHHHS-EEEaaaabxbbb
2act_*_1212act   -127135AVTYQPVSVHHHHS-EEEaaaabxbxb
2ak3_A_182ak3   A2533ITKHFELKHHHHHB--EEaaaabxbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bt4_A_1021bt4   A     PLPPYRIDOXAL-5'-PHOSPHATE W - 103
1ci0_A_951ci0   A     FMNFLAVIN MONONUCLEOTIDE R - 95
1ci0_A_951ci0   A     FMNFLAVIN MONONUCLEOTIDE K - 96
1ci0_A_951ci0   A     FMNFLAVIN MONONUCLEOTIDE A - 97
1ci0_A_951ci0   A     FMNFLAVIN MONONUCLEOTIDE F - 111
1ckm_A_1961ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE D - 213
1ckm_A_1961ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE I - 216
1ckm_A_1961ckm   A     GTPGUANOSINE-5'-TRIPHOSPHATE M - 218
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 247
1e5x_A_2471e5x   A     MSESELENOMETHIONINE I - 248
1e5x_A_2471e5x   A     MSESELENOMETHIONINE R - 249
1e5x_A_2471e5x   A     MSESELENOMETHIONINE E - 250
1e5x_A_2471e5x   A     MSESELENOMETHIONINE I - 251
1e5x_A_2471e5x   A     MSESELENOMETHIONINE E - 254
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 255
1e5x_A_2471e5x   A     MSESELENOMETHIONINE L - 259
1iyx_A_2671iyx   A     MGMAGNESIUM ION E - 287
1one_A_2751one   A     MGMAGNESIUM ION E - 295
1one_A_2751one   A     PEPPHOSPHOENOLPYRUVATE E - 295
1one_A_2751one   A     PAG2-PHOSPHO-D-GLYCERIC ACID E - 295
1pdz_*_2741pdz   *     PGA2-PHOSPHOGLYCOLIC ACID E - 294
1pdz_*_2741pdz   *     MNMANGANESE (II) ION E - 294
2ak3_A_182ak3   A     AMPADENOSINE MONOPHOSPHATE K - 18
2ak3_A_182ak3   A     AMPADENOSINE MONOPHOSPHATE S - 35

Clusters included in this Subclass
CLUSTER: HE.1.43
CLUSTER: HE.2.39
CLUSTER: HE.2.86
CLUSTER: HE.3.153
CLUSTER: HE.3.43