Information on SUBCLASS 3.3.5 |
Subclass Accession number: 8322
Subclass: 3.3.5 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 15.6 +/- 14.5 Average RMSD (Å) : 0.986 +/- 0.248 Consensus geometry
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Consensus Sequence: | XpXXchh |
(φψ)-conformation: | aapaaba |
Pattern: | x | [dekpr] | x | x | x | x | [AELM] | x | [AKQR] | x | [DKPR] | [KN] | [ILTV] | [AILVY] | [ACFGVY] |
Conservation: | -0.889 | -0.321 | -0.656 | -0.794 | -0.682 | -0.477 | -0.050 | -0.598 | 1.246 | -0.835 | 0.450 | 2.410 | 1.373 | 0.558 | -0.735 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dhp_A_145 | 1dhp | A | 145 | 159 | PETVGRLAKVKNIIG | HHHHHHHTTSTTEEE | aaaaaaaaaxaaxab |
1dnp_A_107 | 1dnp | A | 111 | 125 | ARDVEVERALRNVVC | HHHHHHHHH-TTSEE | aaaaaaaaaxaabxb |
1f6k_A_148 | 1f6k | A | 148 | 162 | IEQFGELYKNPKVLG | HHHHHHHHTSTTEEE | aaaaaaaaaxaaxae |
1fnb_*_255 | 1fnb | - | 255 | 269 | AVELWEMLKKDNTYV | HHHHHHHTTSTTEEE | aaaaaaaaaxaabbb |
1i8t_A_316 | 1i8t | A | 323 | 337 | KKYRELASREDKVIF | HHHHHHHHH-TTEEE | aaaaaaaaaxaabbx |
1k8q_A_329 | 1k8q | A | 330 | 344 | HDVDLLLSKLPNLIY | HHHHHHHTT-TTEEE | aaaaaaaaapaaxab |
2oat_A_212 | 2oat | A | 212 | 226 | LPALERALQDPNVAA | HHHHHHHTTSTTEEE | aaaaaaaaaxaaxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dnp_A_107 | 1dnp | A | MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID | V - 107 |
1dnp_A_107 | 1dnp | A | MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID | N - 108 |
1dnp_A_107 | 1dnp | A | MHF5,10-METHENYL-6,7,8-TRIHYDROFOLIC ACID | E - 109 |
2oat_A_212 | 2oat | A | PFM1-AMINO-7-(2-METHYL-3-OXIDO-5-((PHOSPHONOXY)METHYL)-4-PYRIDOXAL-5-OXO-6-HEPTENATE | M - 228 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1dhp_A_145 | 1dhp | A | S1PYRUVATE BINDING RESIDUE. | K - 161 |
Clusters included in this Subclass |
CLUSTER: HE.4.105 |
CLUSTER: HE.6.190 |