Information on SUBCLASS 3.4.3 |
Subclass Accession number: 8331
Subclass: 3.4.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 12 Average sequence ID (%) : 12.7 +/- 14.2 Average RMSD (Å) : 0.650 +/- 0.168 Consensus geometry
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Consensus Sequence: | XXXXXhX |
(φψ)-conformation: | aalppbb |
Pattern: | x | [agiklt] | [agiklv] | [afkl] | [AEGKQRS] | [adekqr] | x | [egn] | [hilv] | [dhnpst] | [acgimptv] | x | [agilmpvy] |
Conservation: | -1.120 | -0.802 | -0.349 | 0.049 | 1.051 | 0.153 | -0.387 | 2.361 | 0.710 | 0.659 | -0.792 | -0.330 | -1.204 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c30_A_975 | 1c30 | A | 978 | 990 | AIVLGEAGINPRL | HHHHHHTT---EE | aaaaaaagbbxxx |
1dc1_A_247 | 1dc1 | A | 265 | 277 | RNKFSEKGLSPKT | HHHHHHTT---EE | aaaaaaavbbpxb |
1g8m_A_36 | 1g8m | A | 39 | 51 | ATALRDAGLPVRD | HHHHHHTT---EE | aaaaaaavxwbbx |
1iib_A_13 | 1iib | A | 24 | 36 | RAQAEKYEVPVII | HHHHHHTT--EEE | aaaaaaalxxbbb |
1j0a_A_193 | 1j0a | A | 199 | 211 | SLGLSILNEDIRP | HHHHHHTT---EE | aaaaaaalxxbxw |
1k20_A_14 | 1k20 | A | 25 | 37 | YLAREAYGLDTEA | HHHHHHH---EEE | aaaaaaavxxxbx |
1lvl_*_356 | 1lvl | - | 356 | 368 | PEQASQQGLDCIV | HHHHHHTT--EEE | aaaaaaavbbbxb |
1moq_*_476 | 1moq | - | 484 | 496 | LKLKEISYIHAEA | HHHHHHH--EEEE | aaaaaaavxxxbx |
1nvt_A_26 | 1nvt | A | 31 | 43 | NAAFKDKGLNYVY | HHHHHHTT--EEE | aaaaaaalxxbbb |
1p77_A_16 | 1p77 | A | 21 | 33 | NKLAAQTHQTMEY | HHHHHHTT--EEE | aaaaaaalbxbbb |
1qgi_A_96 | 1qgi | A | 97 | 109 | DGALKRLGINGKM | HHHHHHTT--EEE | aaaaaaavxxbbx |
4gsa_A_328 | 4gsa | A | 344 | 356 | LAIAQETGHAACG | HHHHHHTT---EE | aaaaaaavbxbbe |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g8m_A_36 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | G - 36 |
1g8m_A_36 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | G - 37 |
1g8m_A_36 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | T - 38 |
1g8m_A_36 | 1g8m | A | GGUANOSINE-5'-MONOPHOSPHATE | A - 39 |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | G - 193 |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 194 |
1j0a_A_193 | 1j0a | A | PLPPYRIDOXAL-5'-PHOSPHATE | L - 195 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | S - 14 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | D - 15 |
1k20_A_14 | 1k20 | A | MNMANGANESE (II) ION | A - 16 |
1moq_*_476 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | Y - 476 |
1moq_*_476 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | L - 480 |
1moq_*_476 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | L - 484 |
1moq_*_476 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | K - 485 |
1moq_*_476 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | E - 488 |
1moq_*_476 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | A - 496 |
1p77_A_16 | 1p77 | A | ACTACETATE ION | T - 30 |
Clusters included in this Subclass |
CLUSTER: HE.3.97 |
CLUSTER: HE.4.148 |
CLUSTER: HE.5.47 |