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Information on SUBCLASS 3.4.3
Subclass Accession number: 8331
Subclass: 3.4.3 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 12.7 +/- 14.2
Average RMSD (Å) : 0.650 +/- 0.168

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: XXXXXhX
(φψ)-conformation: aalppbb
Pattern: x[agiklt][agiklv][afkl][AEGKQRS][adekqr]x[egn][hilv][dhnpst][acgimptv]x[agilmpvy]
Conservation:-1.120-0.802-0.3490.0491.0510.153-0.3872.3610.7100.659-0.792-0.330-1.204
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1c30_A_9751c30   A978990AIVLGEAGINPRLHHHHHHTT---EEaaaaaaagbbxxx
1dc1_A_2471dc1   A265277RNKFSEKGLSPKTHHHHHHTT---EEaaaaaaavbbpxb
1g8m_A_361g8m   A3951ATALRDAGLPVRDHHHHHHTT---EEaaaaaaavxwbbx
1iib_A_131iib   A2436RAQAEKYEVPVIIHHHHHHTT--EEEaaaaaaalxxbbb
1j0a_A_1931j0a   A199211SLGLSILNEDIRPHHHHHHTT---EEaaaaaaalxxbxw
1k20_A_141k20   A2537YLAREAYGLDTEAHHHHHHH---EEEaaaaaaavxxxbx
1lvl_*_3561lvl   -356368PEQASQQGLDCIVHHHHHHTT--EEEaaaaaaavbbbxb
1moq_*_4761moq   -484496LKLKEISYIHAEAHHHHHHH--EEEEaaaaaaavxxxbx
1nvt_A_261nvt   A3143NAAFKDKGLNYVYHHHHHHTT--EEEaaaaaaalxxbbb
1p77_A_161p77   A2133NKLAAQTHQTMEYHHHHHHTT--EEEaaaaaaalbxbbb
1qgi_A_961qgi   A97109DGALKRLGINGKMHHHHHHTT--EEEaaaaaaavxxbbx
4gsa_A_3284gsa   A344356LAIAQETGHAACGHHHHHHTT---EEaaaaaaavbxbbe
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g8m_A_361g8m   A     GGUANOSINE-5'-MONOPHOSPHATE G - 36
1g8m_A_361g8m   A     GGUANOSINE-5'-MONOPHOSPHATE G - 37
1g8m_A_361g8m   A     GGUANOSINE-5'-MONOPHOSPHATE T - 38
1g8m_A_361g8m   A     GGUANOSINE-5'-MONOPHOSPHATE A - 39
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE G - 193
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE T - 194
1j0a_A_1931j0a   A     PLPPYRIDOXAL-5'-PHOSPHATE L - 195
1k20_A_141k20   A     MNMANGANESE (II) ION S - 14
1k20_A_141k20   A     MNMANGANESE (II) ION D - 15
1k20_A_141k20   A     MNMANGANESE (II) ION A - 16
1moq_*_4761moq   *     MPD2-METHYL-2,4-PENTANEDIOL Y - 476
1moq_*_4761moq   *     MPD2-METHYL-2,4-PENTANEDIOL L - 480
1moq_*_4761moq   *     GLPGLUCOSAMINE 6-PHOSPHATE L - 484
1moq_*_4761moq   *     GLPGLUCOSAMINE 6-PHOSPHATE K - 485
1moq_*_4761moq   *     GLPGLUCOSAMINE 6-PHOSPHATE E - 488
1moq_*_4761moq   *     MPD2-METHYL-2,4-PENTANEDIOL A - 496
1p77_A_161p77   A     ACTACETATE ION T - 30

Clusters included in this Subclass
CLUSTER: HE.3.97
CLUSTER: HE.4.148
CLUSTER: HE.5.47