|
|
|
|
|
|
|
| Information on SUBCLASS 3.26.1 |
|
Subclass Accession number: 8392
Subclass: 3.26.1 
Type: HE alpha-beta DB: ArchDB-EC Image coordinates: 
 Consensus coordinates:
|
Number of loops: 3 Average sequence ID (%) : 7.0 +/- 8.0 Average RMSD (Å) : 1.033 +/- 0.289 Consensus geometry
|
| Consensus Sequence: | XXXXXXh |
| (φψ)-conformation: | aapapbb |
| Pattern: | [AFK] | x | [DR] | x | [AMT] | x | x | [AFL] | x | [AGK] | x | [AR] | [DPT] | x | [KV] | [ALV] | x | [ILT] | [ANV] |
| Conservation: | -1.295 | -0.869 | 1.895 | -0.869 | 0.195 | -0.869 | -0.656 | -0.231 | 0.153 | -0.018 | -0.231 | 2.320 | 0.621 | -0.231 | 0.792 | 0.621 | -1.082 | 0.833 | -1.082 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1c9k_A_12 | 1c9k | A | 12 | 30 | KSRHAEALIGDAPQVLYIA | HHHHHHHHH-S-SSEEEEE | aaaaaaaaaeaxabbbbxx |
| 1kbl_A_519 | 1kbl | A | 521 | 539 | FERIMVWADKFRTLKVRTN | HHHHHHHHHHH--SEEEEE | aaaaaaaaaaaxaxxbbbx |
| 1zpd_A_192 | 1zpd | A | 198 | 216 | AVDETLKFIANRDKVAVLV | HHHHHHHHHTT-S-EEEEE | aaaaaaaaaaabaxbbbbx |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1c9k_A_12 | 1c9k | A | PO4PHOSPHATE ION | K - 12 |
| 1c9k_A_12 | 1c9k | A | PO4PHOSPHATE ION | S - 13 |
| 1c9k_A_12 | 1c9k | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | S - 13 |
| 1c9k_A_12 | 1c9k | A | PO4PHOSPHATE ION | R - 14 |
| 1c9k_A_12 | 1c9k | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | Y - 28 |
| 1c9k_A_12 | 1c9k | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | I - 29 |
| 1c9k_A_12 | 1c9k | A | 5GPGUANOSINE-5'-MONOPHOSPHATE | A - 30 |
| Clusters included in this Subclass |
| CLUSTER: HE.4.247 |
| For any comment or web-related incidence, send an email to the webmaster. |
|