Information on SUBCLASS 4.1.8 |
Subclass Accession number: 8413
Subclass: 4.1.8 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 21.2 +/- 30.6 Average RMSD (Å) : 0.560 +/- 0.195 Consensus geometry
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Consensus Sequence: | pXXPphph |
(φψ)-conformation: | aabaappb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.014 | -0.421 | -0.459 | -0.307 | -0.437 | -0.307 | -0.610 | -0.610 | 3.396 | 0.033 | -0.376 | 0.682 | -0.094 | -0.459 | -0.761 | 0.744 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a8u_A_237 | 1a8u | A | 237 | 252 | ARVFHKALPSAEYVEV | HHHHHHHSTTSEEEEE | aaaaaaabaaxxbbbx |
1brt_*_237 | 1brt | - | 237 | 252 | ARVFHKALPSAEYVEV | HHHHHHH-TTSEEEEE | aaaaaaabaaxxbbbb |
1fp2_A_201 | 1fp2 | A | 203 | 218 | AKIICETFPKLKCIVF | HHHHHHH-TT-EEEEE | aaaaaaabaaxxbbxb |
1nhp_*_10 | 1nhp | - | 16 | 31 | VEELLNLHPDAEIQWY | HHHHHHH-TTSEEEEE | aaaaaaabaaxxbbbb |
1qfj_A_114 | 1qfj | A | 121 | 136 | LLTALARNPNRDITIY | HHHHHHH-TT--EEEE | aaaaaaabaapxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | T - 202 |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | F - 218 |
1fp2_A_201 | 1fp2 | A | SAHS-ADENOSYL-L-HOMOCYSTEINE | D - 219 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | H - 10 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 11 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | G - 12 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | Y - 31 |
1nhp_*_10 | 1nhp | * | FADFLAVIN-ADENINE DINUCLEOTIDE | E - 32 |
Clusters included in this Subclass |
CLUSTER: HE.3.199 |
CLUSTER: HE.4.179 |