Information on SUBCLASS 4.16.8 |
Subclass Accession number: 8467
Subclass: 4.16.8 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 16.7 +/- 15.4 Average RMSD (Å) : 1.067 +/- 0.416 Consensus geometry
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Consensus Sequence: | XXXXXPXX |
(φψ)-conformation: | aapabpbb |
Pattern: | [IKL] | [DPQ] | [LTW] | [V] | x | x | [AIV] | [KL] | x | x | [AST] | [ADK] | [GKL] | [P] | [SV] | x |
Conservation: | -0.434 | 0.012 | -0.243 | 1.414 | -0.243 | -0.753 | 0.139 | 0.066 | -0.370 | -0.817 | 0.203 | -0.434 | -0.944 | 3.136 | -0.170 | -0.562 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1o94_A_280 | 1o94 | A | 280 | 295 | IPWVKLVKQVSKKPVL | HHHHHHHHTT-SS-EE | aaaaaaaaaaxabxbb |
1qmh_A_99 | 1qmh | A | 103 | 118 | LQTVLPALWFADGPSR | HHHHHHHHTTSSS-EE | aaaaaaaaaaxabwbb |
1ujp_A_191 | 1ujp | A | 191 | 206 | KDLVRRIKARTALPVA | HHHHHHHHTT--S-EE | aaaaaaaaaabaxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qmh_A_99 | 1qmh | A | CITCITRIC ACID | L - 101 |
1ujp_A_191 | 1ujp | A | CITCITRIC ACID | V - 207 |
1ujp_A_191 | 1ujp | A | CITCITRIC ACID | G - 208 |
Clusters included in this Subclass |
CLUSTER: HE.5.282 |