Information on SUBCLASS 4.29.2 |
Subclass Accession number: 8496
Subclass: 4.29.2 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 13.3 +/- 13.8 Average RMSD (Å) : 0.800 +/- 0.216 Consensus geometry
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Consensus Sequence: | XphpXXhh |
(φψ)-conformation: | aapappbb |
Pattern: | [DGST] | x | x | x | [EFK] | [ACFM] | x | [EKS] | x | [DKQ] | x | [KP] | [IV] | [FLVY] | [AGIY] |
Conservation: | -0.339 | -0.057 | -0.971 | -0.094 | -0.541 | -0.511 | -0.625 | 0.668 | -0.301 | 0.577 | -0.856 | 2.168 | 2.020 | 0.121 | -1.259 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a9x_B_1749 | 1a9x | B | 1753 | 1767 | TAIQKFLETDIPVFG | HHHHHHTTS---EEE | aaaaaaaabaxwbbb |
1bfd_*_500 | 1bfd | - | 505 | 519 | GSLQEALSAKGPVLI | HHHHHHHH-SS-EEE | aaaaaaaaxabxbbb |
1jg7_A_78 | 1jg7 | A | 82 | 96 | SAQKFMAKYKSKIYY | HHHHHHHH--S-EEE | aaaaaaaaxaxxbxx |
4uag_A_94 | 4uag | A | 94 | 108 | DIELFCREAQAPIVA | HHHHHHTT--S-EEE | aaaaaaaapabpbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a9x_B_1749 | 1a9x | B | CYG2-AMINO-4-(AMINO-3-OXO-PROPYLSULFANYLCARBONYL)-BUTYRIC ACID | G - 1767 |
4uag_A_94 | 4uag | A | UAGURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE | D - 94 |
4uag_A_94 | 4uag | A | UAGURIDINE-5'-DIPHOSPHATE-N-ACETYLMURAMOYL-L-ALANINE-D-GLUTAMATE | I - 95 |
4uag_A_94 | 4uag | A | KCXLYSINE NZ-CARBOXYLIC ACID | T - 110 |
Clusters included in this Subclass |
CLUSTER: HE.5.190 |