Information on SUBCLASS 6.21.1 |
Subclass Accession number: 8665
Subclass: 6.21.1 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 45.8 +/- 21.5 Average RMSD (Å) : 0.275 +/- 0.050 Consensus geometry
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Consensus Sequence: | XXXpXhpGXp |
(φψ)-conformation: | aappaaNpbb |
Pattern: | [IL] | [DE] | [T] | [M] | [IMV] | [ADNT] | [AS] | [L] | x | [CS] | [CT] | [HQY] | x | [AGN] | [CSY] | [G] | [TV] | [ST] | [V] | [IV] |
Conservation: | 0.118 | 0.533 | 1.356 | 1.356 | -0.205 | -1.344 | -0.141 | 0.711 | -1.585 | -0.198 | 0.635 | -0.069 | -1.586 | -1.071 | -1.086 | 2.000 | -0.429 | -0.096 | 0.711 | 0.390 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d1t_A_272 | 1d1t | A | 272 | 291 | LETMIDALASCHMNYGTSVV | HHHHHHHHTTS-TTT-EEEE | aaaaaaaaaaxpaaaxbbxx |
1ht0_A_272 | 1ht0 | A | 272 | 291 | LDTMMASLLCCHEACGTSVI | HHHHHHHHHHB-TTT-EEEE | aaaaaaaaaaxpaaaxbbbx |
1n8k_A_272 | 1n8k | A | 272 | 291 | LDTMVTALSCCQEAYGVSVI | HHHHHHHHHHB-TTT-EEEE | aaaaaaaaaaxpaaNxbbbx |
1p0f_A_1271 | 1p0f | A | 1271 | 1290 | IETMMNALQSTYCGSGVTVV | HHHHHHHHHTB-TTT-EEEE | aaaaaaaaaaxxaaNpbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d1t_A_272 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 274 |
1d1t_A_272 | 1d1t | A | CACCACODYLATE ION | H - 283 |
1d1t_A_272 | 1d1t | A | CACCACODYLATE ION | Y - 286 |
1d1t_A_272 | 1d1t | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | V - 291 |
1ht0_A_272 | 1ht0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 273 |
1ht0_A_272 | 1ht0 | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 291 |
1n8k_A_272 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | D - 273 |
1n8k_A_272 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | T - 274 |
1n8k_A_272 | 1n8k | A | NAJNICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM) | I - 291 |
1p0f_A_1271 | 1p0f | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | T - 1273 |
1p0f_A_1271 | 1p0f | A | NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE | V - 1290 |
Clusters included in this Subclass |
CLUSTER: HE.7.51 |