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Information on SUBCLASS 1.2.9
Subclass Accession number: 87
Subclass: 1.2.9 PSSM
Type: HE alpha-beta
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004175 (>50 %)  GO:0008233 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 6.1 +/- 8.3
Average RMSD (Å) : 0.400 +/- 0.100

Consensus geometry
d (Å): 7 delta (°): 45-90 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XpXpX
(φψ)-conformation: aappb
Pattern: xx[EKY]x[AFL][DSV][ST][AGT][NRS][FK]x
Conservation:-0.166-0.452-0.022-1.169-0.452-1.0262.388-0.0220.5510.372-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ic6_A_2481ic6   A249258CRYIADTANK.HHHHHHHSEE.aaaaaaaxxb.
1l0l_B_4071l0l   B413423AAKKFVSGRKSHHHHHHHS-EEaaaaaaaxpbb
1n62_B_3011n62   B301311RMENLSTTSFAHHHHHHHS-EEaaaaaaabpxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ic6_A_2481ic6   A     CACALCIUM ION C - 249
1ic6_A_2481ic6   A     CACALCIUM ION N - 257
1ic6_A_2481ic6   A     CACALCIUM ION K - 258

Clusters included in this Subclass
CLUSTER: HE.2.86