Information on SUBCLASS 1.2.9 |
Subclass Accession number: 87
Subclass: 1.2.9 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004175 (>50 %) GO:0008233 (>50 %) |
Number of loops: 3 Average sequence ID (%) : 6.1 +/- 8.3 Average RMSD (Å) : 0.400 +/- 0.100 Consensus geometry
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Consensus Sequence: | XpXpX |
(φψ)-conformation: | aappb |
Pattern: | x | x | [EKY] | x | [AFL] | [DSV] | [ST] | [AGT] | [NRS] | [FK] | x |
Conservation: | -0.166 | -0.452 | -0.022 | -1.169 | -0.452 | -1.026 | 2.388 | -0.022 | 0.551 | 0.372 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ic6_A_248 | 1ic6 | A | 249 | 258 | CRYIADTANK. | HHHHHHHSEE. | aaaaaaaxxb. |
1l0l_B_407 | 1l0l | B | 413 | 423 | AAKKFVSGRKS | HHHHHHHS-EE | aaaaaaaxpbb |
1n62_B_301 | 1n62 | B | 301 | 311 | RMENLSTTSFA | HHHHHHHS-EE | aaaaaaabpxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ic6_A_248 | 1ic6 | A | CACALCIUM ION | C - 249 |
1ic6_A_248 | 1ic6 | A | CACALCIUM ION | N - 257 |
1ic6_A_248 | 1ic6 | A | CACALCIUM ION | K - 258 |
Clusters included in this Subclass |
CLUSTER: HE.2.86 |