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Information on SUBCLASS 10.3.1
Subclass Accession number: 8746
Subclass: 10.3.1 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 64.5 +/- 17.4
Average RMSD (Å) : 0.340 +/- 0.114

Consensus geometry
d (Å): 17 delta (°): 90-135 theta (°): 90-135 rho (°): 225-270
Consensus Sequence: XSIPXKXRPLXcRh
(φψ)-conformation: aappaaabwpplbp
Pattern: [KR][KR][T][W][ef][S][IL][P][ael][KQ]x[R][P][L][KP][DG][R][il][N][ILV][IV][IL]
Conservation:-0.111-0.1030.4722.910-1.1350.066-0.3181.285-1.399-0.278-1.4170.4721.2850.066-0.543-0.5260.472-1.2030.879-0.443-0.122-0.309
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aoe_A_561aoe   A5677RKTWESIPQKFRPLPDRLNIILHHHHHHS-GGG-S-TTSEEEEEaaaaaaxpaaabwxxvbxxbbb
1df7_A_441df7   A4465RRTWDSLPAKVRPLPGRRNVVLHHHHHHS-GGGSS-TTSEEEEEaaaaaaxxaaabwxxvbxxbbx
1dyr_*_591dyr   -5980RKTWESIPLQFRPLKGRINVVIHHHHHHS-TTT-S-TTSEEEEEaaaaaaxpaaabwxxvbxbbbx
1kmv_A_541kmv   A5475KKTWFSIPEKNRPLKGRINLVLHHHHHHS-GGG-S-TTSEEEEEaaaaaaxwaaabwpxvbxbbbx
8dfr_*_548dfr   -5475KKTWFSIPEKNRPLKDRINIVLHHHHHHS-GGG-S-TTEEEEEEaaaaaaxpaaabwxpvbxxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 56
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 57
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 58
1aoe_A_561aoe   A     GW37-(1-ETHYL-PROPYL)-7H-PYRROLO-[3,2-F]QUINAZOLINE-1,3-DIAMINE T - 58
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 59
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 61
1aoe_A_561aoe   A     GW37-(1-ETHYL-PROPYL)-7H-PYRROLO-[3,2-F]QUINAZOLINE-1,3-DIAMINE S - 61
1aoe_A_561aoe   A     GW37-(1-ETHYL-PROPYL)-7H-PYRROLO-[3,2-F]QUINAZOLINE-1,3-DIAMINE I - 62
1aoe_A_561aoe   A     GW37-(1-ETHYL-PROPYL)-7H-PYRROLO-[3,2-F]QUINAZOLINE-1,3-DIAMINE L - 69
1aoe_A_561aoe   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 77
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 44
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 45
1df7_A_441df7   A     GOLGLYCEROL R - 45
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 46
1df7_A_441df7   A     MTXMETHOTREXATE T - 46
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 47
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 49
1df7_A_441df7   A     MTXMETHOTREXATE S - 49
1df7_A_441df7   A     MTXMETHOTREXATE L - 50
1df7_A_441df7   A     MTXMETHOTREXATE P - 51
1df7_A_441df7   A     MTXMETHOTREXATE K - 53
1df7_A_441df7   A     MTXMETHOTREXATE V - 54
1df7_A_441df7   A     MTXMETHOTREXATE L - 57
1df7_A_441df7   A     MTXMETHOTREXATE P - 58
1df7_A_441df7   A     MTXMETHOTREXATE R - 60
1df7_A_441df7   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 65
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 59
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 60
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 61
1dyr_*_591dyr   *     TOPTRIMETHOPRIM T - 61
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 62
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 64
1dyr_*_591dyr   *     TOPTRIMETHOPRIM S - 64
1dyr_*_591dyr   *     TOPTRIMETHOPRIM I - 65
1dyr_*_591dyr   *     TOPTRIMETHOPRIM P - 66
1dyr_*_591dyr   *     TOPTRIMETHOPRIM F - 69
1dyr_*_591dyr   *     TOPTRIMETHOPRIM L - 72
1dyr_*_591dyr   *     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 80
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 54
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE K - 55
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE T - 56
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 56
1kmv_A_541kmv   A     DMSDIMETHYL SULFOXIDE T - 56
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE W - 57
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE S - 59
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 59
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE I - 60
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE P - 61
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE N - 64
1kmv_A_541kmv   A     SULSULFATE ANION L - 67
1kmv_A_541kmv   A     LII(Z)-6-(2-[2,5-DIMETHOXYPHENYL]ETHEN-1-YL)-2,4-DIAMINO-5-METHYLPYRIDO[2,3-D]PYRIMIDINE L - 67
1kmv_A_541kmv   A     SULSULFATE ANION K - 68
1kmv_A_541kmv   A     SULSULFATE ANION G - 69
1kmv_A_541kmv   A     SULSULFATE ANION R - 70
1kmv_A_541kmv   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE L - 75
8dfr_*_548dfr   *     CACALCIUM ION K - 54

Clusters included in this Subclass
CLUSTER: HE.10.7