Information on SUBCLASS 1.6.1 |
Subclass Accession number: 8875
Subclass: 1.6.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 9.5 +/- 10.7 Average RMSD (Å) : 0.567 +/- 0.186 Consensus geometry
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Consensus Sequence: | XXXph |
(φψ)-conformation: | aaIaa |
Pattern: | [ALMVW] | x | [gkst] | [fhlv] | x | [AEGQST] | x | [DETY] | [gil] | [ANP] | x | x | [gly] | [efkq] |
Conservation: | 0.546 | -1.109 | -0.346 | -0.377 | -1.074 | 0.598 | -0.607 | 1.847 | -0.398 | 1.598 | 1.151 | -0.858 | -1.067 | 0.096 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c7s_A_788 | 1c7s | A | 799 | 812 | ANILGQRELAKLDK | HHHHHHTHHHHHHH | aaaaaaNaaaaaaa |
1f0n_A_97 | 1f0n | A | 97 | 110 | WETFLTSELPQWLS | HHHHHHTHHHHHHH | aaaaaaIaaaaaaa |
1j5s_A_430 | 1j5s | A | 436 | 449 | LVKHVSYDGPKALF | HHHHHHTHHHHHHH | aaaaaaIaaaaaaa |
1j7n_A_238 | 1j7n | A | 244 | 257 | MDKFNEQEINLSLE | HHHHHHTHHHHHHH | aaaaaaNaaaaaaa |
1lpp_*_403 | 1lpp | - | 409 | 422 | VLGDLGFTLARRYF | HHHHHHTHHHHHHH | aaaaaaIaaaaaaa |
1mty_B_241 | 1mty | B | 245 | 258 | AFSVHAVYDALFGQ | HHHHHHTHHHHHHH | aaaaaaIaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f0n_A_97 | 1f0n | A | MPD2-METHYL-2,4-PENTANEDIOL | T - 102 |
1f0n_A_97 | 1f0n | A | MPD2-METHYL-2,4-PENTANEDIOL | S - 103 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | I - 406 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | V - 409 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | L - 410 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | L - 413 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | G - 414 |
1lpp_*_403 | 1lpp | * | HDS1-HEXADECANOSULFONIC ACID | F - 415 |
Clusters included in this Subclass |
CLUSTER: HH.0.29 |
CLUSTER: HH.2.172 |