Information on SUBCLASS 2.2.3 |
Subclass Accession number: 8919
Subclass: 2.2.3 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 21 Average sequence ID (%) : 10.2 +/- 12.4 Average RMSD (Å) : 0.476 +/- 0.221 Consensus geometry
|
Consensus Sequence: | XXXphp |
(φψ)-conformation: | aalpaa |
Pattern: | x | x | [afilmwy] | [fiklv] | x | x | [degkqr] | [adeknr] | [afgipvwy] | [dehnqrsty] | x | [agilmvw] | x | [adekqr] |
Conservation: | -1.118 | -1.107 | -0.173 | 0.212 | 0.546 | -0.313 | 0.245 | 2.184 | -0.644 | 0.814 | -1.073 | 0.221 | -1.106 | 1.313 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a59_*_279 | 1a59 | - | 288 | 301 | AMIKHYDRPEMLGL | HHHHHTT-THHHHH | aaaaaalbwaaaaa |
1a8h_*_387 | 1a8h | - | 392 | 405 | RPLVRELKFHVALE | HHHHHTT-HHHHHH | aaaaaavbaaaaaa |
1b4u_A_68 | 1b4u | A | 71 | 84 | KAAVLARDYNAMID | HHHHHHT-HHHHHH | aaaaaalbaaaaaa |
1d2z_A_98 | 1d2z | A | 103 | 116 | ALFKKLKLHNAMRL | HHHHHTT-HHHHHH | aaaaaalxaaaaaa |
1eg9_B_528 | 1eg9 | B | 542 | 555 | AHLLDIQAYRAWLE | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1eua_A_189 | 1eua | A | 189 | 202 | ADALEAGDYDRITK | HHHHHTT-HHHHHH | aaaaaalxaaaaaa |
1f4l_A_425 | 1f4l | A | 429 | 442 | GEAWESREFGKAVR | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1g8k_A_563 | 1g8k | A | 576 | 589 | DMYQKDGKAEMAAQ | HHHHHTT-HHHHHH | aaaaaavbaaaaaa |
1gte_A_97 | 1gte | A | 101 | 114 | ITSISNKNYYGAAK | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1ile_*_675 | 1ile | - | 692 | 705 | TEALEAYDPTTSAR | HHHHHTT-HHHHHH | aaaaaalbaaaaaa |
1ixm_A_15 | 1ixm | A | 40 | 53 | KGNLSLQKYDRVFE | HHHHHTT-HHHHHH | aaaaaaUxaaaaaa |
1jcl_A_107 | 1jcl | A | 107 | 120 | YRALMAGNEQVGFD | HHHHHTT--HHHHH | aaaaaavbaaaaaa |
1lam_*_205 | 1lam | - | 206 | 219 | SWIEEQEMGSFLSV | HHHHHTT-HHHHHH | aaaaaalxaaaaaa |
1msk_*_1069 | 1msk | - | 1074 | 1087 | DAFEAQHDDYNKIM | HHHHHTT-HHHHHH | aaaaaalxaaaaaa |
1mxs_A_201 | 1mxs | A | 201 | 214 | SSWIKNGDWARIEA | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1mzh_A_193 | 1mzh | A | 193 | 206 | LSAFKSEKYDFVVE | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1o0y_A_122 | 1o0y | A | 122 | 135 | VGMLKAKEWEYVYE | HHHHHTT-HHHHHH | aaaaaavxaaaaaa |
1obb_A_419 | 1obb | A | 430 | 443 | LEAFLTGDIRIIKE | HHHHHH--HHHHHH | aaaaaavxaaaaaa |
1oh0_A_6 | 1oh0 | A | 17 | 30 | IELVDVGDIEAIVQ | HHHHHHT-HHHHHH | aaaaaavxaaaaaa |
1pa1_A_764 | 1pa1 | A | 777 | 790 | GAKFIMGDSSVQDQ | HHHHHTT-TTHHHH | aaaaaagxaaaaaa |
5csm_A_173 | 5csm | A | 177 | 190 | TKLIKSKDVEGIMK | HHHHHTT-HHHHHH | aaaaaalxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a59_*_279 | 1a59 | * | COACOENZYME A | M - 309 |
1a59_*_279 | 1a59 | * | COACOENZYME A | K - 313 |
1eua_A_189 | 1eua | A | ACTACETATE ION | A - 189 |
1eua_A_189 | 1eua | A | ACTACETATE ION | L - 192 |
1eua_A_189 | 1eua | A | ACTACETATE ION | E - 193 |
1g8k_A_563 | 1g8k | A | MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE | D - 563 |
1gte_A_97 | 1gte | A | FS4IRON/SULFUR CLUSTER | I - 97 |
1gte_A_97 | 1gte | A | FS4IRON/SULFUR CLUSTER | K - 98 |
1gte_A_97 | 1gte | A | FS4IRON/SULFUR CLUSTER | F - 100 |
1gte_A_97 | 1gte | A | FS4IRON/SULFUR CLUSTER | I - 101 |
1msk_*_1069 | 1msk | * | SAMS-ADENOSYLMETHIONINE | R - 1094 |
1msk_*_1069 | 1msk | * | SAMS-ADENOSYLMETHIONINE | E - 1097 |
1msk_*_1069 | 1msk | * | SAMS-ADENOSYLMETHIONINE | A - 1098 |
1msk_*_1069 | 1msk | * | SAMS-ADENOSYLMETHIONINE | E - 1101 |
1msk_*_1069 | 1msk | * | ACTACETATE ION | Y - 1102 |
1msk_*_1069 | 1msk | * | ACTACETATE ION | L - 1103 |
1msk_*_1069 | 1msk | * | ACTACETATE ION | R - 1106 |
1oh0_A_6 | 1oh0 | A | EQUEQUILENIN | Y - 16 |
1oh0_A_6 | 1oh0 | A | EQUEQUILENIN | I - 17 |
1oh0_A_6 | 1oh0 | A | EQUEQUILENIN | V - 20 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gte_A_97 | 1gte | A | FA1FS4 BINDING SITE FOR CHAIN A | I - 97 |
1oh0_A_6 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | Y - 16 |
Clusters included in this Subclass |
CLUSTER: HH.3.14 |
CLUSTER: HH.5.50 |