Information on SUBCLASS 2.3.5 |
Subclass Accession number: 8939
Subclass: 2.3.5 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 13.3 +/- 16.9 Average RMSD (Å) : 0.633 +/- 0.186 Consensus geometry
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Consensus Sequence: | XpXXhX |
(φψ)-conformation: | aabpaa |
Pattern: | [lpw] | [afgkl] | [kltv] | [dehr] | [ilty] | [adnp] | [lpvy] | [ael] | [et] | [ILV] |
Conservation: | -0.421 | -1.129 | -0.408 | -0.084 | -0.189 | -0.090 | -0.911 | -0.005 | 0.826 | 2.412 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e0t_A_244 | 1e0t | A | 247 | 256 | LGVEIPVEEV | HHHHS-HHHH | aaaabpaaaa |
1f8m_A_320 | 1f8m | A | 320 | 329 | WKKHLDDATI | HHHH--HHHH | aaaabxaaaa |
1gvf_A_53 | 1gvf | A | 53 | 62 | TFKHIALEEI | HHHHS-HHHH | aaaabxaaaa |
1k3p_A_73 | 1k3p | A | 76 | 85 | LATDSNYLEV | HHHHS-HHHH | aaaabbaaaa |
1m2k_A_38 | 1m2k | A | 38 | 47 | LWNRYRPEEL | HHHHS-HHHH | aaaaxbaaaa |
1q44_A_103 | 1q44 | A | 103 | 112 | PLLVTNPHLL | HHHHS-HHHH | aaaabxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gvf_A_53 | 1gvf | A | EGLETHYLENE GLYCOL | Y - 63 |
1gvf_A_53 | 1gvf | A | EGLETHYLENE GLYCOL | S - 67 |
1gvf_A_53 | 1gvf | A | EGLETHYLENE GLYCOL | S - 70 |
1gvf_A_53 | 1gvf | A | EGLETHYLENE GLYCOL | T - 71 |
1m2k_A_38 | 1m2k | A | APRADENOSINE-5-DIPHOSPHORIBOSE | W - 39 |
Clusters included in this Subclass |
CLUSTER: HH.1.63 |
CLUSTER: HH.2.110 |