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Information on SUBCLASS 2.4.4
Subclass Accession number: 8953
Subclass: 2.4.4 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 28.2 +/- 29.9
Average RMSD (Å) : 0.480 +/- 0.249

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: pXXpGX
(φψ)-conformation: aapbea
Pattern: [i][aiv][DEKQR][kqst][AS][EST][G][eg][itv][FKR][ENQ][nr][ALM][agq][AQS][ALTV][lvw]
Conservation:-0.053-0.4700.115-0.4510.9930.2843.281-1.000-0.488-0.4040.644-0.476-0.042-0.9370.112-0.257-0.851
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1dt0_A_521dt0   A5571IVKTSSGGIFNNAAQVWHHHH--HHHHHHHHHHHaaaaxbeaaaaaaaaaa
1isa_A_521isa   A5571IIRSSEGGVFNNAAQVWHHHH--HHHHHHHHHHHaaaabbeaaaaaaaaaa
1n7o_A_4711n7o   A485501IADMSEGETKQRLQSLVHHHHS-HHHHHHHHHHHaaaaxbeaaaaaaaaaa
1qnn_A_531qnn   A5672IVQKSEGGIFNNAGQTLHHHH--HHHHHHHHHHHaaaaxbeaaaaaaaaaa
2occ_F_92occ   F925DEEQATGLEREVMLAARHHHH--HHHHHHHHHHHaaaapbeaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1dt0_A_521dt0   A     FEFE (III) ION Q - 69
1dt0_A_521dt0   A     FEFE (III) ION H - 73
1dt0_A_521dt0   A     FEFE (III) ION Y - 76
1isa_A_521isa   A     FE2FE (II) ION Q - 69
1isa_A_521isa   A     FE2FE (II) ION H - 73
1isa_A_521isa   A     FE2FE (II) ION Y - 76
1qnn_A_531qnn   A     FEFE (III) ION Q - 70
1qnn_A_531qnn   A     FEFE (III) ION H - 74
1qnn_A_531qnn   A     FEFE (III) ION Y - 77
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1qnn_A_531qnn   A FE1METAL BINDING SITE OF CHAIN AH - 74

Clusters included in this Subclass
CLUSTER: HH.1.85
CLUSTER: HH.3.94