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Information on SUBCLASS 3.3.2
Subclass Accession number: 8981
Subclass: 3.3.2 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 9

Average sequence ID (%) : 15.0 +/- 15.3
Average RMSD (Å) : 0.711 +/- 0.276

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hhGhXpp
(φψ)-conformation: aalppaa
Pattern: [gilmtv]xx[fhilv][clmvy]x[aiklv][aclv][GKQ][filv][dep][AEQRS][ADENS][cdkq]x[depr]x[aflmvw]
Conservation:-0.450-0.248-0.447-0.9270.093-1.032-0.131-0.0562.5690.9481.6120.6410.956-0.865-1.299-0.714-0.368-0.283
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cpt_*_1611cpt   -163180LHVVMTALGVPEDDEPLMHHHHHHHHT--GGGHHHHaaaaaaaagxwaaaaaaa
1dqa_A_7531dqa   A757774VTAIYIACGQDAAQNVGSHHHHHHHTT--GGGHHHHaaaaaaaavxxaaaaaaa
1fp2_A_541fp2   A5471LSNLVSILQVPSSKIGNVHHHHHHHHT--GGGHHHHaaaaaaaalxxaaaaaaa
1gd6_A_51gd6   A825LVHELRKHGFEENLMRNWHHHHHHHTT--GGGHHHHaaaaaaaavxpaaaaaaa
1lfk_A_1471lfk   A149166GAVLCELVGVPRDDRDMFHHHHHHHHT--GGGHHHHaaaaaaaagxpaaaaaaa
1n40_A_1381n40   A143160TALHCKVLGIPQEDGPKLHHHHHHHHT--GGGHHHHaaaaaaaavbxaaaaaaa
1nvm_A_2801nvm   A281298ETLGLGYAGVYSSFLRHAHHHHHHHHT--TTHHHHHaaaaaaaavbpaaaaaaa
1q5d_A_1541q5d   A155172MRAISALLKVPAECDEKFHHHHHHHTT--GGGHHHHaaaaaaaalbwaaaaaaa
1qmq_A_1571qmq   A160177IRIFMLLAGLPEEDIPHLHHHHHHHHT--GGGHHHHaaaaaaaalbxaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cpt_*_1611cpt   *     HEMPROTOPORPHYRIN IX CONTAINING FE V - 166
1dqa_A_7531dqa   A     COACOENZYME A N - 755
1dqa_A_7531dqa   A     MAH3-HYDROXY-3-METHYL-GLUTARIC ACID N - 755
1dqa_A_7531dqa   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE N - 755
1dqa_A_7531dqa   A     MAH3-HYDROXY-3-METHYL-GLUTARIC ACID D - 767
1dqa_A_7531dqa   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE D - 767
1dqa_A_7531dqa   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE Q - 770
1lfk_A_1471lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 152
1lfk_A_1471lfk   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 155
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 145
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 146
1n40_A_1381n40   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 149
1nvm_A_2801nvm   A     SULSULFATE ANION G - 284
1nvm_A_2801nvm   A     SULSULFATE ANION Y - 287
1nvm_A_2801nvm   A     MNMANGANESE (II) ION Y - 291
1nvm_A_2801nvm   A     OXLOXALATE ION Y - 291
1q5d_A_1541q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE I - 158
1q5d_A_1541q5d   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 161
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE T - 179
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE A - 180
1q5d_A_1541q5d   A     EPB7,11-DIHYDROXY-8,8,10,12,16-PENTAMETHYL-3-[1-METHYL-2-(2-METHYL-THIAZOL-4-YL)VINYL]-4,17-DIOXABICYCLO[14.1.0]HEPTADECANE-5,9-DIONE R - 181
1qmq_A_1571qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 163
1qmq_A_1571qmq   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 166
1qmq_A_1571qmq   A     DRBDELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C9-ADAMANTANE RUTHENIUM (II) Q - 183
1qmq_A_1571qmq   A     LRBLAMBDA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE) -C9-ADAMANTANE RUTHENIUM (II) M - 184
1qmq_A_1571qmq   A     DRBDELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C9-ADAMANTANE RUTHENIUM (II) M - 184
1qmq_A_1571qmq   A     ACTACETATE ION M - 184
1qmq_A_1571qmq   A     LRBLAMBDA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE) -C9-ADAMANTANE RUTHENIUM (II) T - 185
1qmq_A_1571qmq   A     DRBDELTA-BIS(2,2'-BIPYRIDINE)-(5-METHYL-2-2'-BIPYRIDINE)-C9-ADAMANTANE RUTHENIUM (II) T - 185
1qmq_A_1571qmq   A     ACTACETATE ION T - 185

Clusters included in this Subclass
CLUSTER: HH.6.13