Information on SUBCLASS 3.23.1 |
Subclass Accession number: 9029
Subclass: 3.23.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 4.4 +/- 9.0 Average RMSD (Å) : 0.567 +/- 0.115 Consensus geometry
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Consensus Sequence: | XXXXXXX |
(φψ)-conformation: | aapgbaa |
Pattern: | x | [EPS] | x | x | [AFK] | [AGS] | x | [KPR] | [AE] | x | x | [GKN] | [RWY] | [ILV] | x |
Conservation: | -1.043 | 0.170 | -0.589 | -0.339 | -1.195 | 0.776 | -0.892 | 0.624 | 1.319 | -1.195 | -1.043 | 0.321 | 0.928 | 1.989 | 0.170 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a4m_A_65 | 1a4m | A | 69 | 83 | MPVIAGCREAIKRIA | HHHHTT-HHHHHHHH | aaaapvbaaaaaaaa |
1d4d_A_422 | 1d4d | A | 422 | 436 | DSIRKSLKAIEGYVH | HHHHTT-THHHHHHH | aaaaxgbaaaaaaaa |
1n3b_B_67 | 1n3b | B | 71 | 85 | RERIFANPEEKNWLN | HHHHSS-HHHHHHHH | aaaaxgxaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a4m_A_65 | 1a4m | A | PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE | F - 65 |
1a4m_A_65 | 1a4m | A | PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE | M - 69 |
1d4d_A_422 | 1d4d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | A - 430 |
1d4d_A_422 | 1d4d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | E - 432 |
1d4d_A_422 | 1d4d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | G - 433 |
1d4d_A_422 | 1d4d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | Y - 434 |
1d4d_A_422 | 1d4d | A | HEMPROTOPORPHYRIN IX CONTAINING FE | H - 436 |
1n3b_B_67 | 1n3b | B | MSESELENOMETHIONINE | R - 67 |
1n3b_B_67 | 1n3b | B | MSESELENOMETHIONINE | A - 69 |
1n3b_B_67 | 1n3b | B | MSESELENOMETHIONINE | L - 70 |
1n3b_B_67 | 1n3b | B | MSESELENOMETHIONINE | R - 73 |
Clusters included in this Subclass |
CLUSTER: HH.3.157 |