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Information on SUBCLASS 3.23.1
Subclass Accession number: 9029
Subclass: 3.23.1 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 4.4 +/- 9.0
Average RMSD (Å) : 0.567 +/- 0.115

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 45-90
Consensus Sequence: XXXXXXX
(φψ)-conformation: aapgbaa
Pattern: x[EPS]xx[AFK][AGS]x[KPR][AE]xx[GKN][RWY][ILV]x
Conservation:-1.0430.170-0.589-0.339-1.1950.776-0.8920.6241.319-1.195-1.0430.3210.9281.9890.170
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4m_A_651a4m   A6983MPVIAGCREAIKRIAHHHHTT-HHHHHHHHaaaapvbaaaaaaaa
1d4d_A_4221d4d   A422436DSIRKSLKAIEGYVHHHHHTT-THHHHHHHaaaaxgbaaaaaaaa
1n3b_B_671n3b   B7185RERIFANPEEKNWLNHHHHSS-HHHHHHHHaaaaxgxaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a4m_A_651a4m   A     PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE F - 65
1a4m_A_651a4m   A     PRH6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE M - 69
1d4d_A_4221d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE A - 430
1d4d_A_4221d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE E - 432
1d4d_A_4221d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE G - 433
1d4d_A_4221d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE Y - 434
1d4d_A_4221d4d   A     HEMPROTOPORPHYRIN IX CONTAINING FE H - 436
1n3b_B_671n3b   B     MSESELENOMETHIONINE R - 67
1n3b_B_671n3b   B     MSESELENOMETHIONINE A - 69
1n3b_B_671n3b   B     MSESELENOMETHIONINE L - 70
1n3b_B_671n3b   B     MSESELENOMETHIONINE R - 73

Clusters included in this Subclass
CLUSTER: HH.3.157