Information on SUBCLASS 5.5.1 |
Subclass Accession number: 9105
Subclass: 5.5.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 12.1 +/- 13.7 Average RMSD (Å) : 0.888 +/- 0.242 Consensus geometry
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Consensus Sequence: | hXcXpXXhX |
(φψ)-conformation: | aapaappaa |
Pattern: | [almv] | [ADRST] | x | [filmtv] | [adgnrs] | [DKNT] | [dkps] | [DENQST] | [ailt] | [ADGNPST] | x | x | [DEK] | [fikl] | x | x | [agly] | [AFLMTV] | x | [AEKNRT] | [AFILTV] |
Conservation: | 0.288 | 0.738 | -0.925 | -0.122 | -0.980 | 2.050 | 0.010 | 0.869 | 0.248 | -0.088 | -0.854 | -1.119 | 2.592 | -0.071 | -0.670 | -1.160 | -0.909 | 0.373 | -0.895 | 0.146 | 0.478 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bd3_A_43 | 1bd3 | A | 49 | 69 | MTIIRDKETPKEEFVFYADRL | HHHHH-TT--HHHHHHHHHHH | aaaaapaapxaaaaaaaaaaa |
1brm_A_187 | 1brm | A | 187 | 207 | ADELATPSSAILDIERKVTTL | HHHHH-TT--HHHHHHHHHHH | aaaaaxaabxaaaaaaaaaaa |
1ezf_A_64 | 1ezf | A | 80 | 100 | DTLEDDMTISVEKKVPLLHNF | HHHHH-TTS-HHHHHHHHHHH | aaaaaxaaxxaaaaaaaaaaa |
1gnl_A_168 | 1gnl | A | 178 | 198 | LAKTLDDSLSVADLVALTLET | HHHTT-TT--HHHHHHHHHHH | aaaaaxaaxxaaaaaaaaaaa |
1h0o_A_202 | 1h0o | A | 212 | 232 | LRWIGDKEATYGERVVAFAAV | HHHHH-SSS-HHHHHHHHHHH | aaaaaxaapxaaaaaaaaaaa |
1klx_A_29 | 1klx | A | 31 | 51 | LSLVSNSQINKQKLFQYLSKA | HHHHT-TTS-HHHHHHHHHHH | aaaaaxaabxaaaaaaaaaaa |
1o5o_A_10 | 1o5o | A | 16 | 36 | LTIMRDKNTGPKEFRELLREI | HHHHHSTT--HHHHHHHHHHH | aaaaapaaxxaaaaaaaaaaa |
2occ_E_8 | 2occ | E | 16 | 36 | VTYFNKPDIDAWELRKGMNTL | HHHHH-TT--HHHHHHHHHHH | aaaaaxaaxxaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h0o_A_202 | 1h0o | A | CO1CO BINDING SITE FOR CHAIN A | E - 233 |
Clusters included in this Subclass |
CLUSTER: HH.4.77 |
CLUSTER: HH.5.92 |
CLUSTER: HH.6.112 |