Information on SUBCLASS 5.7.1 |
Subclass Accession number: 9110
Subclass: 5.7.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 17.2 +/- 20.7 Average RMSD (Å) : 0.893 +/- 0.343 Consensus geometry
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Consensus Sequence: | XXXXXhXpX |
(φψ)-conformation: | aalpppbaa |
Pattern: | [dkprs] | [denr] | [iklmtv] | [aiklv] | x | [gnqt] | x | [ekpst] | [hlvy] | [adgnps] | [ekqrty] | x | x | [adrs] | x | [awy] |
Conservation: | -0.116 | 1.739 | -0.251 | -0.446 | -0.675 | 1.674 | -0.668 | -0.253 | 0.509 | 0.919 | -0.706 | -1.393 | -1.175 | 1.150 | -1.060 | 0.751 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a06_*_187 | 1a06 | - | 187 | 202 | PEVLAQKPYSKAVDCW | HHHHTT----THHHHH | aaaaalbpxbaaaaaa |
1blx_A_188 | 1blx | A | 188 | 203 | PEVLLQSSYATPVDLW | HHHHTT----THHHHH | aaaaalxxbbawaaaa |
1cki_A_187 | 1cki | A | 187 | 202 | INTHLGIEQSRRDDLE | HHHHTTB---HHHHHH | aaaaavbxxbaaaaaa |
1csn_*_187 | 1csn | - | 187 | 202 | INTHLGREQSRRDDLE | HHHHTT----HHHHHH | aaaaavxpxbaaaaaa |
1e9y_A_5 | 1e9y | A | 22 | 37 | KRKEKGIKLNYVEAVA | HHHHT---B-HHHHHH | aaaaavbppbaaaaaa |
1fot_A_251 | 1fot | A | 251 | 266 | PEVVSTKPYNKSIDWW | HHHHTT--B-TTHHHH | aaaaalbwbxaaaaaa |
1jks_A_186 | 1jks | A | 186 | 201 | PEIVNYEPLGLEADMW | HHHHTT--B-THHHHH | aaaaalbwbbaaaaaa |
1kqp_A_228 | 1kqp | A | 232 | 247 | DDYLEGKEVSAKVSEA | HHHHTT----HHHHHH | aaaaavxxxpaaaaaa |
1mq4_A_298 | 1mq4 | A | 298 | 313 | PEMIEGRMHDEKVDLW | HHHHTT--B-THHHHH | aaaaavxxbbaaaaaa |
1ng4_A_335 | 1ng4 | A | 343 | 358 | SDLIMNKEVNQDWLHA | HHHHTT----HHHHHH | aaaaavxxbpaaaaaa |
1nst_A_842 | 1nst | A | 862 | 877 | LLYKMGQTLPTWLRED | HHHHHT----HHHHHH | aaaaavxxxxaaaaaa |
1o6y_A_185 | 1o6y | A | 185 | 200 | PEQARGDSVDARSDVY | HHHHTT----HHHHHH | aaaaalxxbbaaaaaa |
1pmn_A_232 | 1pmn | A | 232 | 247 | PEVILGMGYKENVDIW | HHHHTT----TTHHHH | aaaaalbxbbaaaaaa |
4ubp_A_5 | 4ubp | A | 22 | 37 | RRKARGLKLNYPEAVA | HHHHTT--B-HHHHHH | aaaaagxxxbaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fot_A_251 | 1fot | A | TPOPHOSPHOTHREONINE | V - 253 |
1fot_A_251 | 1fot | A | TPOPHOSPHOTHREONINE | Y - 259 |
1kqp_A_228 | 1kqp | A | ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE | Y - 228 |
1kqp_A_228 | 1kqp | A | POPPYROPHOSPHATE 2- | Y - 228 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | E - 230 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | S - 241 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | K - 243 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | V - 244 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | E - 246 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | A - 247 |
1kqp_A_228 | 1kqp | A | EDO1,2-ETHANEDIOL | L - 248 |
1kqp_A_228 | 1kqp | A | ADJNICOTINAMIDE-ADENINE-DINUCLEOTIDE-ADENYLATE INTERMEDIATE | M - 254 |
1mq4_A_298 | 1mq4 | A | PO4PHOSPHATE ION | M - 300 |
Clusters included in this Subclass |
CLUSTER: HH.5.128 |
CLUSTER: HH.6.12 |
CLUSTER: HH.7.4 |