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Information on 1gvj
PDB: 1gvj
Compound: c-ets-1 protein
Classification: TRANSCRIPTION
Entry date in PDB: 2004-02-06
Resolution [Å]: 1.53
R-Factor: 0.208


CHAIN: A
SWISS-PROT/TREMBL: P14921
   KEYWORD: 3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Proto-oncogene    Transcription regulation    3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Proto-oncogene    Transcription regulation   
SCOP: a.4.5.21 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    ets domain    ETS-1 transcription factor, residues 331-440    Human (Homo sapiens)
GO:  nucleus    DNA binding    transcription factor activity    regulation of transcription, DNA-dependent   


CHAIN: B
SWISS-PROT/TREMBL: P14921
   KEYWORD: 3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Proto-oncogene    Transcription regulation    3D-structure    Alternative splicing    DNA-binding    Nuclear protein    Phosphorylation    Proto-oncogene    Transcription regulation   
SCOP: a.4.5.21 All alpha proteins    DNA/RNA-binding 3-helical bundle    "Winged helix" DNA-binding domain    ets domain    ETS-1 transcription factor, residues 331-440    Human (Homo sapiens)
GO:  nucleus    DNA binding    transcription factor activity    regulation of transcription, DNA-dependent   
1gvj Image
Image Source: PDB

Stored Loops of 1gvj

Loops in ArchDB40 clusters

1gvj_A_362 - EH => SUBCLASS : 3.7.1
1gvj_A_418 - HH => SUBCLASS : 3.1.2

Loops in ArchDB95 clusters

1gvj_A_362 - EH => SUBCLASS : 3.3.3
1gvj_A_418 - HH => SUBCLASS : 3.4.2
1gvj_A_368 - HH => SUBCLASS : 6.16.1
1gvj_A_386 - HE => SUBCLASS : 2.4.1
1gvj_A_337 - HE => SUBCLASS : 7.12.1
1gvj_A_402 - HA => SUBCLASS : 6.8.2

Loops not clustered in ArchDB

1gvj_A_411 - EH
1gvj_A_355 - HA
1gvj_A_304 - HH
1gvj_A_323 - HH

Homologous structures to 1gvj classified in ArchDB

1awc A - percentage of sequence identity: 64
1bc8 C - percentage of sequence identity: 60
1dux C - percentage of sequence identity: 63
1dux F - percentage of sequence identity: 63
1fli A - percentage of sequence identity: 70
1gvj A - percentage of sequence identity: 100
1gvj B - percentage of sequence identity: 100
1k78 B - percentage of sequence identity: 100
1k78 F - percentage of sequence identity: 100
1k79 A - percentage of sequence identity: 100
1k79 D - percentage of sequence identity: 100
1k7a A - percentage of sequence identity: 100
1k7a D - percentage of sequence identity: 100
1md0 A - percentage of sequence identity: 100
1md0 B - percentage of sequence identity: 100
1mdm B - percentage of sequence identity: 100
1r36 A - percentage of sequence identity: 99
2stt A - percentage of sequence identity: 100
2stw A - percentage of sequence identity: 100