PDB: 1igw Compound: isocitrate lyase Classification: LYASE Entry date in PDB: 2001-09-05 Resolution [Å]: 2.10 R-Factor: 0.187

CHAIN: A SWISS-PROT/TREMBL: P05313    KEYWORD: 3D-structure    Complete proteome    Glyoxylate bypass    Lyase    Phosphorylation    Tricarboxylic acid cycle    EC: 4.1.3.1 SCOP: c.1.12.7 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Phosphoenolpyruvate/pyruvate domain    Phosphoenolpyruvate mutase/Isocitrate lyase-like    Isocitrate lyase    Escherichia coli GO:  catalytic activity    catalytic activity    isocitrate lyase activity    isocitrate lyase activity    glyoxylate cycle    glyoxylate cycle    metabolism    metabolism    CHAIN: B SWISS-PROT/TREMBL: P05313    KEYWORD: 3D-structure    Complete proteome    Glyoxylate bypass    Lyase    Phosphorylation    Tricarboxylic acid cycle    EC: 4.1.3.1 SCOP: c.1.12.7 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Phosphoenolpyruvate/pyruvate domain    Phosphoenolpyruvate mutase/Isocitrate lyase-like    Isocitrate lyase    Escherichia coli GO:  catalytic activity    catalytic activity    isocitrate lyase activity    isocitrate lyase activity    glyoxylate cycle    glyoxylate cycle    metabolism    metabolism    CHAIN: C SWISS-PROT/TREMBL: P05313    KEYWORD: 3D-structure    Complete proteome    Glyoxylate bypass    Lyase    Phosphorylation    Tricarboxylic acid cycle    EC: 4.1.3.1 SCOP: c.1.12.7 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Phosphoenolpyruvate/pyruvate domain    Phosphoenolpyruvate mutase/Isocitrate lyase-like    Isocitrate lyase    Escherichia coli GO:  catalytic activity    catalytic activity    isocitrate lyase activity    isocitrate lyase activity    glyoxylate cycle    glyoxylate cycle    metabolism    metabolism    CHAIN: D SWISS-PROT/TREMBL: P05313    KEYWORD: 3D-structure    Complete proteome    Glyoxylate bypass    Lyase    Phosphorylation    Tricarboxylic acid cycle    EC: 4.1.3.1 SCOP: c.1.12.7 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    Phosphoenolpyruvate/pyruvate domain    Phosphoenolpyruvate mutase/Isocitrate lyase-like    Isocitrate lyase    Escherichia coli GO:  catalytic activity    catalytic activity    isocitrate lyase activity    isocitrate lyase activity    glyoxylate cycle    glyoxylate cycle    metabolism    metabolism

Image Source: PDB

Loops in ArchDB95 clusters

1igw_A_202 - EH => SUBCLASS : 1.1.9
1igw_A_399 - HH => SUBCLASS : 1.3.1
1igw_A_253 - HA => SUBCLASS : 5.4.1

Loops in ArchDB-EC clusters

1igw_B_399 - HH => SUBCLASS : 1.3.1

Loops not clustered in ArchDB

1igw_A_182 - AR
1igw_B_182 - AR
1igw_A_182 - AR
1igw_A_228 - AR
1igw_A_240 - AR
1igw_B_228 - AR
1igw_A_228 - AR
1igw_A_240 - AR
1igw_A_313 - EH
1igw_A_345 - EH
1igw_B_66 - EH
1igw_A_285 - EH
1igw_A_263 - EH
1igw_B_202 - EH
1igw_B_263 - EH
1igw_B_285 - EH
1igw_B_88 - EH
1igw_B_314 - EH
1igw_B_345 - EH
1igw_A_66 - EH
1igw_A_88 - EH
1igw_A_154 - EH
1igw_B_154 - EH
1igw_B_240 - HA
1igw_A_253 - HA
1igw_A_116 - HE
1igw_A_44 - HE
1igw_B_330 - HE
1igw_B_295 - HE
1igw_B_269 - HE
1igw_A_165 - HE
1igw_B_206 - HE
1igw_B_165 - HE
1igw_B_116 - HE
1igw_B_74 - HE
1igw_B_44 - HE
1igw_A_336 - HE
1igw_A_295 - HE
1igw_A_269 - HE
1igw_A_206 - HE
1igw_A_74 - HE
1igw_A_383 - HH
1igw_A_374 - HH
1igw_B_4 - HH
1igw_B_29 - HH
1igw_B_92 - HH
1igw_B_353 - HH
1igw_B_374 - HH
1igw_B_383 - HH
1igw_A_4 - HH
1igw_A_29 - HH
1igw_A_92 - HH
1igw_A_353 - HH

1f61 A - percentage of sequence identity: 62
1f61 B - percentage of sequence identity: 62
1f8i A - percentage of sequence identity: 61
1f8i B - percentage of sequence identity: 61
1f8i C - percentage of sequence identity: 61
1f8i D - percentage of sequence identity: 61
1f8m A - percentage of sequence identity: 62
1f8m B - percentage of sequence identity: 62
1f8m C - percentage of sequence identity: 62
1f8m D - percentage of sequence identity: 62
1igw A - percentage of sequence identity: 100
1igw B - percentage of sequence identity: 100
1igw C - percentage of sequence identity: 100
1igw D - percentage of sequence identity: 100