PDB: 1kgi Compound: transthyretin Classification: TRANSPORT PROTEIN Entry date in PDB: 2002-11-27 Resolution [Å]: 1.80 R-Factor: 0.207

CHAIN: A SWISS-PROT/TREMBL: P02767    KEYWORD: 3D-structure    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Rat (Rattus norvegicus) GO:  carrier activity    steroid binding    transport    CHAIN: B SWISS-PROT/TREMBL: P02767    KEYWORD: 3D-structure    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Rat (Rattus norvegicus) GO:  carrier activity    steroid binding    transport    CHAIN: C SWISS-PROT/TREMBL: P02767    KEYWORD: 3D-structure    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Rat (Rattus norvegicus) GO:  carrier activity    steroid binding    transport    CHAIN: D SWISS-PROT/TREMBL: P02767    KEYWORD: 3D-structure    Retinol-binding    Signal    Thyroid hormone    Transport    Vitamin A    SCOP: b.3.4.1 All beta proteins    Prealbumin-like    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Transthyretin (prealbumin)    Rat (Rattus norvegicus) GO:  carrier activity    steroid binding    transport

Image Source: PDB

Loops in ArchDB95 clusters

1kgi_A_67 - EH => SUBCLASS : 1.1.18
1kgi_A_23 - AR => SUBCLASS : 4.2.6
1kgi_A_41 - AR => SUBCLASS : 5.8.1
1kgi_A_75 - HE => SUBCLASS : 7.19.1
1kgi_A_29 - HA => SUBCLASS : 5.1.1
1kgi_A_29 - HA => SUBCLASS : 5.1.2

Loops not clustered in ArchDB

1kgi_A_54 - AR
1kgi_A_91 - AR
1kgi_A_12 - HA
1kgi_A_104 - HA

1bm7 A - percentage of sequence identity: 83
1bm7 B - percentage of sequence identity: 83
1bmz A - percentage of sequence identity: 83
1bmz B - percentage of sequence identity: 83
1bz8 A - percentage of sequence identity: 82
1bz8 B - percentage of sequence identity: 82
1bzd A - percentage of sequence identity: 82
1bzd B - percentage of sequence identity: 82
1bze A - percentage of sequence identity: 82
1bze B - percentage of sequence identity: 82
1dvq A - percentage of sequence identity: 83
1dvq B - percentage of sequence identity: 83
1dvs A - percentage of sequence identity: 83
1dvs B - percentage of sequence identity: 83
1dvt A - percentage of sequence identity: 83
1dvt B - percentage of sequence identity: 83
1dvu A - percentage of sequence identity: 83
1dvu B - percentage of sequence identity: 83
1dvx A - percentage of sequence identity: 83
1dvx B - percentage of sequence identity: 83
1dvy A - percentage of sequence identity: 83
1dvy B - percentage of sequence identity: 83
1dvz A - percentage of sequence identity: 83
1dvz B - percentage of sequence identity: 83
1e3f A - percentage of sequence identity: 83
1e3f B - percentage of sequence identity: 83
1e4h A - percentage of sequence identity: 83
1e4h B - percentage of sequence identity: 83
1e5a A - percentage of sequence identity: 83
1e5a B - percentage of sequence identity: 83
1eta 1 - percentage of sequence identity: 83
1eta 2 - percentage of sequence identity: 83
1etb 1 - percentage of sequence identity: 82
1etb 2 - percentage of sequence identity: 82
1f41 A - percentage of sequence identity: 83
1f41 B - percentage of sequence identity: 83
1f86 A - percentage of sequence identity: 83
1f86 B - percentage of sequence identity: 83
1fh2 A - percentage of sequence identity: 82
1fh2 B - percentage of sequence identity: 82
1fhn A - percentage of sequence identity: 82
1fhn B - percentage of sequence identity: 82
1g1o A - percentage of sequence identity: 80
1g1o B - percentage of sequence identity: 80
1g1o C - percentage of sequence identity: 80
1g1o D - percentage of sequence identity: 80
1gke A - percentage of sequence identity: 100
1gke B - percentage of sequence identity: 100
1gke C - percentage of sequence identity: 100
1gke D - percentage of sequence identity: 100
1gko A - percentage of sequence identity: 81
1gko B - percentage of sequence identity: 81
1gko C - percentage of sequence identity: 81
1gko D - percentage of sequence identity: 81
1ict A - percentage of sequence identity: 83
1ict B - percentage of sequence identity: 83
1ict C - percentage of sequence identity: 83
1ict D - percentage of sequence identity: 83
1ict E - percentage of sequence identity: 83
1ict F - percentage of sequence identity: 83
1ict G - percentage of sequence identity: 83
1ict H - percentage of sequence identity: 83
1ie4 A - percentage of sequence identity: 100
1ie4 B - percentage of sequence identity: 100
1ie4 C - percentage of sequence identity: 100
1ie4 D - percentage of sequence identity: 100
1iii A - percentage of sequence identity: 82
1iii B - percentage of sequence identity: 82
1iik A - percentage of sequence identity: 82
1iik B - percentage of sequence identity: 82
1ijn A - percentage of sequence identity: 81
1ijn B - percentage of sequence identity: 81
1kgi A - percentage of sequence identity: 100
1kgi B - percentage of sequence identity: 100
1kgi C - percentage of sequence identity: 100
1kgi D - percentage of sequence identity: 100
1kgj A - percentage of sequence identity: 100
1kgj B - percentage of sequence identity: 100
1kgj C - percentage of sequence identity: 100
1kgj D - percentage of sequence identity: 100
1oo2 A - percentage of sequence identity: 62
1oo2 B - percentage of sequence identity: 62
1oo2 C - percentage of sequence identity: 62
1oo2 D - percentage of sequence identity: 62
1qab A - percentage of sequence identity: 83
1qab B - percentage of sequence identity: 83
1qab C - percentage of sequence identity: 83
1qab D - percentage of sequence identity: 83
1qwh A - percentage of sequence identity: 83
1qwh B - percentage of sequence identity: 83
1rlb A - percentage of sequence identity: 83
1rlb B - percentage of sequence identity: 83
1rlb C - percentage of sequence identity: 83
1rlb D - percentage of sequence identity: 83
1sn0 A - percentage of sequence identity: 61
1sn0 B - percentage of sequence identity: 61
1sn0 C - percentage of sequence identity: 61
1sn0 D - percentage of sequence identity: 61
1sn2 A - percentage of sequence identity: 61
1sn2 B - percentage of sequence identity: 61
1sn2 C - percentage of sequence identity: 61
1sn2 D - percentage of sequence identity: 61
1sn5 A - percentage of sequence identity: 61
1sn5 B - percentage of sequence identity: 61
1sn5 C - percentage of sequence identity: 61
1sn5 D - percentage of sequence identity: 61
1sok A - percentage of sequence identity: 81
1sok B - percentage of sequence identity: 81
1soq A - percentage of sequence identity: 81
1soq B - percentage of sequence identity: 81
1soq C - percentage of sequence identity: 81
1soq D - percentage of sequence identity: 81
1tfp A - percentage of sequence identity: 80
1tfp B - percentage of sequence identity: 80
1tha A - percentage of sequence identity: 83
1tha B - percentage of sequence identity: 83
1thc A - percentage of sequence identity: 83
1thc B - percentage of sequence identity: 83
1tlm A - percentage of sequence identity: 83
1tlm B - percentage of sequence identity: 83
1tsh A - percentage of sequence identity: 82
1tsh B - percentage of sequence identity: 82
1tt6 A - percentage of sequence identity: 83
1tt6 B - percentage of sequence identity: 83
1tta A - percentage of sequence identity: 83
1tta B - percentage of sequence identity: 83
1ttb A - percentage of sequence identity: 82
1ttb B - percentage of sequence identity: 82
1ttc A - percentage of sequence identity: 82
1ttc B - percentage of sequence identity: 82
1ttr A - percentage of sequence identity: 82
1ttr B - percentage of sequence identity: 82
1tyr A - percentage of sequence identity: 83
1tyr B - percentage of sequence identity: 83
1tz8 A - percentage of sequence identity: 83
1tz8 B - percentage of sequence identity: 83
1tz8 C - percentage of sequence identity: 83
1tz8 D - percentage of sequence identity: 83
1u21 A - percentage of sequence identity: 83
1u21 B - percentage of sequence identity: 83
1x7s A - percentage of sequence identity: 82
1x7s B - percentage of sequence identity: 82
1x7t A - percentage of sequence identity: 84
1x7t B - percentage of sequence identity: 84
1y1d A - percentage of sequence identity: 83
1y1d B - percentage of sequence identity: 83
1z7j A - percentage of sequence identity: 83
1z7j B - percentage of sequence identity: 83
1zcr A - percentage of sequence identity: 83
1zcr B - percentage of sequence identity: 83
1zd6 A - percentage of sequence identity: 83
1zd6 B - percentage of sequence identity: 83
2b77 A - percentage of sequence identity: 83
2b77 B - percentage of sequence identity: 83
2b9a A - percentage of sequence identity: 83
2b9a B - percentage of sequence identity: 83
2f7i A - percentage of sequence identity: 83
2f7i B - percentage of sequence identity: 83
2f8i A - percentage of sequence identity: 83
2f8i B - percentage of sequence identity: 83
2fbr A - percentage of sequence identity: 83
2fbr B - percentage of sequence identity: 83
2pab A - percentage of sequence identity: 83
2pab B - percentage of sequence identity: 83
2rox A - percentage of sequence identity: 83
2rox B - percentage of sequence identity: 83
2roy A - percentage of sequence identity: 83
2roy B - percentage of sequence identity: 83
2trh A - percentage of sequence identity: 82
2trh B - percentage of sequence identity: 82
2try A - percentage of sequence identity: 82
2try B - percentage of sequence identity: 82
5ttr A - percentage of sequence identity: 82
5ttr B - percentage of sequence identity: 82
5ttr C - percentage of sequence identity: 82
5ttr D - percentage of sequence identity: 82
5ttr E - percentage of sequence identity: 82
5ttr F - percentage of sequence identity: 82
5ttr G - percentage of sequence identity: 82
5ttr H - percentage of sequence identity: 82