PDB: 1npd Compound: hypothetical shikimate 5-dehydrogenase-like protei Classification: STRUCTURAL GENOMICS, UNKNOWN FUNCTION Entry date in PDB: 2003-01-28 Resolution [Å]: 2.30 R-Factor: 0.217

CHAIN: A SWISS-PROT/TREMBL: P28244    KEYWORD: 3D-structure    Aromatic amino acid biosynthesis    Complete proteome    NAD    Oxidoreductase    EC: 1.1.1.- SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Putative shikimate dehydrogenase YdiB    Escherichia coli SCOP: c.58.1.5 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Shikimate dehydrogenase-like    Putative shikimate dehydrogenase YdiB    Escherichia coli GO:  cytoplasm    shikimate 5-dehydrogenase activity    aromatic amino acid family biosynthesis, shikimate pathway    CHAIN: B SWISS-PROT/TREMBL: P28244    KEYWORD: 3D-structure    Aromatic amino acid biosynthesis    Complete proteome    NAD    Oxidoreductase    EC: 1.1.1.- SCOP: c.2.1.7 Alpha and beta proteins (a/b)    NAD(P)-binding Rossmann-fold domains    NAD(P)-binding Rossmann-fold domains    Aminoacid dehydrogenase-like, C-terminal domain    Putative shikimate dehydrogenase YdiB    Escherichia coli SCOP: c.58.1.5 Alpha and beta proteins (a/b)    Aminoacid dehydrogenase-like, N-terminal domain    Aminoacid dehydrogenase-like, N-terminal domain    Shikimate dehydrogenase-like    Putative shikimate dehydrogenase YdiB    Escherichia coli GO:  cytoplasm    shikimate 5-dehydrogenase activity    aromatic amino acid family biosynthesis, shikimate pathway

Image Source: PDB

Loops in ArchDB-EC clusters

1npd_A_260 - HH => SUBCLASS : 5.1.3

Loops not clustered in ArchDB

1npd_A_63 - AR
1npd_A_252 - EH
1npd_A_228 - EH
1npd_A_178 - EH
1npd_A_150 - EH
1npd_A_129 - EH
1npd_A_100 - EH
1npd_A_80 - EH
1npd_A_37 - EH
1npd_A_8 - EH
1npd_A_93 - HA
1npd_A_199 - HA
1npd_A_83 - HE
1npd_A_106 - HE
1npd_A_134 - HE
1npd_A_159 - HE
1npd_A_191 - HE
1npd_A_240 - HE
1npd_A_27 - HE
1npd_A_49 - HE

1npd A - percentage of sequence identity: 100
1npd B - percentage of sequence identity: 100
1o9b A - percentage of sequence identity: 100
1o9b B - percentage of sequence identity: 100
1vi2 A - percentage of sequence identity: 99
1vi2 B - percentage of sequence identity: 99