PDB: 1p0k Compound: isopentenyl-diphosphate delta-isomerase Classification: ISOMERASE Entry date in PDB: 2003-06-17 Resolution [Å]: 1.90 R-Factor: 0.199

CHAIN: A SWISS-PROT/TREMBL: P50740    KEYWORD: 3D-structure    Complete proteome    Flavoprotein    FMN    Isomerase    Isoprene biosynthesis    NADP    EC: 5.3.3.2 SCOP: c.1.4.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    FMN-linked oxidoreductases    FMN-linked oxidoreductases    Isopentenyl-diphosphate delta-isomerase    Bacillus subtilis GO:  cytoplasm    FMN binding    isopentenyl-diphosphate delta-isomerase activity    oxidoreductase activity    electron transport    isoprenoid biosynthesis    CHAIN: B SWISS-PROT/TREMBL: P50740    KEYWORD: 3D-structure    Complete proteome    Flavoprotein    FMN    Isomerase    Isoprene biosynthesis    NADP    EC: 5.3.3.2 SCOP: c.1.4.1 Alpha and beta proteins (a/b)    TIM beta/alpha-barrel    FMN-linked oxidoreductases    FMN-linked oxidoreductases    Isopentenyl-diphosphate delta-isomerase    Bacillus subtilis GO:  cytoplasm    FMN binding    isopentenyl-diphosphate delta-isomerase activity    oxidoreductase activity    electron transport    isoprenoid biosynthesis

Image Source: PDB

Loops in ArchDB40 clusters

1p0k_A_326 - EH => SUBCLASS : 1.5.1
1p0k_A_119 - EH => SUBCLASS : 5.1.1
1p0k_A_253 - EH => SUBCLASS : 5.15.1
1p0k_A_52 - AR => SUBCLASS : 3.9.1
1p0k_A_330 - HH => SUBCLASS : 3.2.3

Loops in ArchDB95 clusters

1p0k_A_326 - EH => SUBCLASS : 1.3.3
1p0k_A_119 - EH => SUBCLASS : 4.2.6
1p0k_A_253 - EH => SUBCLASS : 5.12.1
1p0k_A_52 - AR => SUBCLASS : 3.4.1
1p0k_A_330 - HH => SUBCLASS : 3.1.12

Loops in ArchDB-EC clusters

1p0k_A_330 - HH => SUBCLASS : 3.3.5

Loops not clustered in ArchDB

1p0k_A_52 - AR
1p0k_A_28 - AR
1p0k_A_28 - AR
1p0k_A_58 - EH
1p0k_A_276 - EH
1p0k_A_205 - EH
1p0k_A_89 - EH
1p0k_A_143 - EH
1p0k_A_181 - EH
1p0k_A_47 - HA
1p0k_A_47 - HA
1p0k_A_318 - HE
1p0k_A_263 - HE
1p0k_A_238 - HE
1p0k_A_166 - HE
1p0k_A_129 - HE
1p0k_A_101 - HE
1p0k_A_68 - HE
1p0k_A_192 - HE
1p0k_A_281 - HH

1p0k A - percentage of sequence identity: 100
1p0k B - percentage of sequence identity: 100
1p0n A - percentage of sequence identity: 100
1p0n B - percentage of sequence identity: 100