PDB: 1qa7 Compound: hav 3c proteinase Classification: HYDROLASE Entry date in PDB: 1999-04-19 Resolution [Å]: 1.90 R-Factor: 0.214

CHAIN: A SWISS-PROT/TREMBL: P26582    KEYWORD: 3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    3C cysteine protease (picornain 3C)    Human hepatitis A virus GO:  viral capsid    ATP binding    helicase activity    RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    structural molecule activity    transcription    viral genome replication    CHAIN: B SWISS-PROT/TREMBL: P26582    KEYWORD: 3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    3C cysteine protease (picornain 3C)    Human hepatitis A virus GO:  viral capsid    ATP binding    helicase activity    RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    structural molecule activity    transcription    viral genome replication    CHAIN: C SWISS-PROT/TREMBL: P26582    KEYWORD: 3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    3C cysteine protease (picornain 3C)    Human hepatitis A virus GO:  viral capsid    ATP binding    helicase activity    RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    structural molecule activity    transcription    viral genome replication    CHAIN: D SWISS-PROT/TREMBL: P26582    KEYWORD: 3D-structure    Coat protein    Core protein    Hydrolase    Polyprotein    RNA-directed RNA polymerase    Thiol protease    Transferase    EC: 2.7.7.48 SCOP: b.47.1.4 All beta proteins    Trypsin-like serine proteases    Trypsin-like serine proteases    Viral cysteine protease of trypsin fold    3C cysteine protease (picornain 3C)    Human hepatitis A virus GO:  viral capsid    ATP binding    helicase activity    RNA binding    RNA helicase activity    RNA-directed RNA polymerase activity    structural molecule activity    transcription    viral genome replication

Image Source: PDB

Loops in ArchDB-EC clusters

1qa7_A_2 - HE => SUBCLASS : 0.1.7

Loops not clustered in ArchDB

1qa7_A_85 - AR
1qa7_A_38 - AR
1qa7_A_154 - AR
1qa7_A_64 - AR
1qa7_A_127 - AR
1qa7_A_175 - HA
1qa7_A_136 - HA
1qa7_A_117 - HA
1qa7_A_13 - HA
1qa7_A_75 - HA
1qa7_A_56 - HA
1qa7_A_26 - HA
1qa7_A_187 - HA

1hav A - percentage of sequence identity: 99
1hav B - percentage of sequence identity: 99
1qa7 A - percentage of sequence identity: 100
1qa7 B - percentage of sequence identity: 100
1qa7 C - percentage of sequence identity: 100
1qa7 D - percentage of sequence identity: 100
2a4o A - percentage of sequence identity: 99
2cxv A - percentage of sequence identity: 99