Information on SUBCLASS 2.5.4 |
Subclass Accession number: 7208
Subclass: 2.5.4 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 13.1 +/- 13.0 Average RMSD (Å) : 0.740 +/- 0.195 Consensus geometry
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Consensus Sequence: | hhGphX |
(φψ)-conformation: | bbepaa |
Pattern: | [FIMV] | x | [FILW] | [ALVW] | [G] | [DER] | [ACFIP] | [ADEG] | x | [AGTV] | [CKLMV] | x | [AFKL] | x | [ADEK] | x |
Conservation: | 0.525 | -0.235 | 0.222 | -0.353 | 3.302 | 0.830 | -0.739 | 0.087 | -0.844 | -0.126 | -0.293 | -0.975 | -0.515 | -0.330 | -0.105 | -0.450 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j8f_A_317 | 1j8f | A | 318 | 333 | VAWLGECDQGCLALAE | EEEES-HHHHHHHHHH | bbbxexaaaaaaaaaa |
1m1n_B_366 | 1m1n | B | 367 | 382 | FALWGDPDFVMGLVKF | EEEE--HHHHHHHHHH | bbbbexaaaaaaaaaa |
1ozh_A_318 | 1ozh | A | 318 | 333 | VELVGDIAGTLNKLAQ | EEEES-HHHHHHHHHH | bbbxepaaaaaaaaaa |
1qfj_A_196 | 1qfj | A | 197 | 212 | IYIAGRFEMAKIARDL | EEEES-HHHHHHHHHH | bbbbexaaaaaaaaaa |
1ryp_K_41 | 1ryp | K | 43 | 58 | MSFAGEAGDTVQFAEY | EEEEESHHHHHHHHHH | bbbbexaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1qfj_A_196 | 1qfj | A | GOLGLYCEROL | F - 203 |
Clusters included in this Subclass |
CLUSTER: EH.1.54 |