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Information on SUBCLASS 4.1.5
Subclass Accession number: 9035
Subclass: 4.1.5 PSSM
Type: HH alpha-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 15.0 +/- 21.0
Average RMSD (Å) : 0.920 +/- 0.311

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hpGphXhp
(φψ)-conformation: aalabpaa
Pattern: [EGT][FIL][AEGN]xxx[AIKV][ERS][GK][AEKQ][AIV][ADPS][fpv][ers][kqsy]x[ENQS][ekty][FIY][ailv]
Conservation:-0.1921.188-0.251-0.877-1.116-0.025-0.3340.3072.0860.3581.227-0.182-1.292-0.695-0.918-0.6510.666-0.8772.088-0.509
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a0c_A_3921a0c   A392411GIGADIVSGKADFRSLEKYAHHHHHHHHT---HHHHHHHHeaaaaaaavaxbaaaaaaaa
1a0e_A_3921a0e   A392411GIGRDIVEGKVDFEKLEEYIHHHHHHHHT---HHHHHHHHeaaaaaaavaxbaaaaaaaa
1j5w_A_2291j5w   A242261TFNLLDARGAISVSQRQTYVHHHHHHHTT---HHHHHHHHaaaaaaaalabxaaaaaaaa
1k8t_A_7141k8t   A731750EIENVLKSKQIAPEYKNYFQHHHHHHHTT-B-HHHHHHHHaaaaaaaavabxaaaaaaaa
1o17_A_181o17   A2342ELAKAIIRGEVPEILVSAILHHHHHHHTT-S-HHHHHHHHaaaaaaaavabpaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1j5w_A_2291j5w   A     MSESELENOMETHIONINE D - 234
1j5w_A_2291j5w   A     MSESELENOMETHIONINE Y - 235
1j5w_A_2291j5w   A     MSESELENOMETHIONINE I - 236
1j5w_A_2291j5w   A     MSESELENOMETHIONINE L - 237
1j5w_A_2291j5w   A     MSESELENOMETHIONINE K - 238
1j5w_A_2291j5w   A     MSESELENOMETHIONINE C - 239
1j5w_A_2291j5w   A     MSESELENOMETHIONINE Y - 260
1j5w_A_2291j5w   A     MSESELENOMETHIONINE K - 262
1j5w_A_2291j5w   A     MSESELENOMETHIONINE R - 263
1j5w_A_2291j5w   A     MSESELENOMETHIONINE I - 264
1j5w_A_2291j5w   A     MSESELENOMETHIONINE Q - 265

Clusters included in this Subclass
CLUSTER: HH.4.80