Information on SUBCLASS 1.1.2 |
Subclass Accession number: 90
Subclass: 1.1.2 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 19 Average sequence ID (%) : 11.2 +/- 1.8 Average RMSD (Å) : 0.49 +/- 0.19 Consensus geometry
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Consensus Sequence: | pXXXp |
(φψ)-conformation: | aalbb |
Pattern: | x | x | {ACFILVY} | x | {DEKNQRSTY} | x | x | x | {DEKQRSTY} | x |
Conservation: | 0.186 | -0.526 | 0.028 | -0.575 | 0.945 | -0.565 | 1.925 | -1.481 | -0.758 | 0.821 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b7b_A_21 | 1b7b | A | 36 | 45 | VHLIKQGHRL | HHHHHTT-EE | aaaaaavxxx |
1d6j_B_77 | 1d6j | B | 92 | 101 | KLFADSNSIA | HHHHHTT-EE | aaaaaavbbx |
1e0t_A_253 | 1e0t | A | 265 | 274 | EKCIRARKVV | HHHHHHT-EE | aaaaaavxxb |
1e19_A_176 | 1e19 | A | 180 | 189 | KKLVERGVIV | HHHHHTT-EE | aaaaaavxxb |
1e19_A_23 | 1e19 | A | 38 | 47 | AEIIARGYEV | HHHHHTT-EE | aaaaaavxxb |
1e9e_A_80 | 1e9e | A | 84 | 93 | KEKLSQGVTL | HHHHHTT-EE | aaaaaagxxb |
1ex7_A_82 | 1ex7 | A | 86 | 95 | KQVSKSGKTC | HHHHHHTSEE | aaaaaavbxx |
1fvr_B_1007 | 1fvr | B | 1007 | 1015 | IESLNYSVY. | HHHHHH-EE. | aaaaaavbb. |
1g0w_A_308 | 1g0w | A | 310 | 319 | EVLKRLRLQK | HHHHHHTEEE | aaaaaavbbb |
1i58_B_507 | 1i58 | B | 512 | 521 | NVVESLNGSI | HHHHHTT-EE | aaaaaavbbb |
1ig0_B_103 | 1ig0 | B | 107 | 116 | KYYRKNKVTI | HHHHHTT-EE | aaaaaalxxb |
1ig3_B_97 | 1ig3 | B | 101 | 110 | EYYTKKGCDL | HHHHHTT-EE | aaaaaavxxb |
1jb1_A_161 | 1jb1 | A | 166 | 175 | LELVQRGHRL | HHHHHTT-EE | aaaaaavxxx |
1jm6_A_1321 | 1jm6 | A | 1327 | 1336 | LYAKYFQGDL | HHHHHTT-EE | aaaaaavbbb |
1pfk_A_139 | 1pfk | A | 155 | 164 | DTSSSHQRIS | HHHHHHT-EE | aaaaaalbbb |
1pfk_A_16 | 1pfk | A | 25 | 34 | RSALTEGLEV | HHHHHTT-EE | aaaaaavxbb |
1qh4_A_308 | 1qh4 | A | 310 | 319 | EVLKRLRLQK | HHHHHHTEEE | aaaaaalbbb |
1qk1_A_303 | 1qk1 | A | 305 | 314 | KILENLRLQK | HHHHHHTEEE | aaaaaavbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pfk_A_16 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 21 |
1pfk_A_16 | 1pfk | A | MGMAGNESIUM ION | R - 21 |
1pfk_A_16 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 25 |
1pfk_A_16 | 1pfk | A | MGMAGNESIUM ION | R - 25 |
1pfk_A_139 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | R - 154 |
1pfk_A_139 | 1pfk | A | MGMAGNESIUM ION | R - 154 |
1pfk_A_139 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | S - 158 |
Bibliographic annotations |
Loop | PDB | Chain | Annotation | Residue |
1b7b_A_21 | 1b7b RefA.MARINA,P.M.ALZARI,J.BRAVO,M.URIARTE,B.BARCELONA,I.FITA,V.RUBIO. CARBAMATE KINASE: NEW STRUCTURAL MACHINERY FOR MAKING CARBAMOYL PHOSPHATE, THE COMMON PRECURSOR OF PYRIMIDINES AND ARGININE PROTEIN SCI. v.8;934,1999 | A | CONSERVED RESIDUE | H - 49 |
1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | R - 85 |
1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | V - 90 |
1d6j_B_77 | 1d6j RefI.J.MACRAE,I.H.SEGEL,A.J.FISHER. CRYSTAL STRUCTURE OF ADENOSINE 5'-PHOSPHOSULFATE KINASE FROM PENICILLIUM CHRYSOGENUM BIOCHEMISTRY v.39;1613,2000 | B | MONOMER-MONOMER INTERACTION RESIDUE | L - 93 |
Clusters included in this Subclass |
CLUSTER: HE.2.0 |