Information on SUBCLASS 2.2.19 |
Subclass Accession number: 489
Subclass: 2.2.19 ![]() Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation GO : GO:0004252 (>75 %) GO:0008236 (>75 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 16.4 +/- 15.7 Average RMSD (Å) : 0.786 +/- 0.195 Consensus geometry
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Consensus Sequence: | pXXXGX |
(φψ)-conformation: | bbaaep |
Pattern: | x | x | [ael] | [iltvy] | [avy] | [DENQST] | x | [denp] | x | [G] | [KPRT] | x | x | [AILTV] | [aegnt] | [ltv] |
Conservation: | -0.320 | -0.395 | -0.270 | -0.269 | -0.148 | 0.250 | -0.628 | -0.094 | -0.789 | 3.475 | 0.184 | -0.621 | -0.662 | 0.485 | -0.487 | 0.289 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1at3_A_66 | 1at3 | A | 70 | 85 | VLAVVNDPRGPFFVGL | EEEEEEETTEEEEEEE | xabbbxxaaewbbbbb |
1c9o_A_46 | 1c9o | A | 48 | 63 | SFEIVQGNRGPQAANV | EEEEEEETTEEEEEEE | bbbbbbbaaewbxblx |
1g5h_A_259 | 1g5h | A | 261 | 276 | SKLYYSFPWGKEPIET | EEEEEEETTEEEEEEE | bbbbbxxaaexbwabb |
1gkl_A_828 | 1gkl | A | 830 | 845 | VKETYTGINGTKSLNV | EEEEEEETTEEEEEEE | bxbbbbbaaexbbbbb |
1r0u_A_38 | 1r0u | A | 41 | 56 | LSYYEEHDLGKVKTIV | EEEEEEETTEEEEEEE | bbbbbbbaaexbxbbb |
1sfe_*_15 | 1sfe | - | 15 | 30 | RYALADCELGRCLVAE | EEEEEEETTEEEEEEE | bbbbbxbaaexbbbbb |
4ubp_A_79 | 4ubp | A | 80 | 95 | IQAEATFPDGTKLVTV | EEEEEEETTEEEEEEE | bbbbbxxaaexbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1g5h_A_259 | 1g5h | A | MSESELENOMETHIONINE | E - 275 |
1r0u_A_38 | 1r0u | A | GOLGLYCEROL | Y - 43 |
1r0u_A_38 | 1r0u | A | GOLGLYCEROL | E - 45 |
1r0u_A_38 | 1r0u | A | GOLGLYCEROL | T - 54 |
1r0u_A_38 | 1r0u | A | GOLGLYCEROL | V - 56 |
Clusters included in this Subclass |
CLUSTER: HA.1.28 |