Logo
Information on SUBCLASS 2.2.19
Subclass Accession number: 489
Subclass: 2.2.19 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0004252 (>75 %)  GO:0008236 (>75 %)  
SCOP : 50493 (>75 %)  50494 (>75 %)  50514 (>75 %)  
 Number of loops: 7

Average sequence ID (%) : 16.4 +/- 15.7
Average RMSD (Å) : 0.786 +/- 0.195

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 270-315
Consensus Sequence: pXXXGX
(φψ)-conformation: bbaaep
Pattern: xx[ael][iltvy][avy][DENQST]x[denp]x[G][KPRT]xx[AILTV][aegnt][ltv]
Conservation:-0.320-0.395-0.270-0.269-0.1480.250-0.628-0.094-0.7893.4750.184-0.621-0.6620.485-0.4870.289
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1at3_A_661at3   A7085VLAVVNDPRGPFFVGLEEEEEEETTEEEEEEExabbbxxaaewbbbbb
1c9o_A_461c9o   A4863SFEIVQGNRGPQAANVEEEEEEETTEEEEEEEbbbbbbbaaewbxblx
1g5h_A_2591g5h   A261276SKLYYSFPWGKEPIETEEEEEEETTEEEEEEEbbbbbxxaaexbwabb
1gkl_A_8281gkl   A830845VKETYTGINGTKSLNVEEEEEEETTEEEEEEEbxbbbbbaaexbbbbb
1r0u_A_381r0u   A4156LSYYEEHDLGKVKTIVEEEEEEETTEEEEEEEbbbbbbbaaexbxbbb
1sfe_*_151sfe   -1530RYALADCELGRCLVAEEEEEEEETTEEEEEEEbbbbbxbaaexbbbbb
4ubp_A_794ubp   A8095IQAEATFPDGTKLVTVEEEEEEETTEEEEEEEbbbbbxxaaexbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1g5h_A_2591g5h   A     MSESELENOMETHIONINE E - 275
1r0u_A_381r0u   A     GOLGLYCEROL Y - 43
1r0u_A_381r0u   A     GOLGLYCEROL E - 45
1r0u_A_381r0u   A     GOLGLYCEROL T - 54
1r0u_A_381r0u   A     GOLGLYCEROL V - 56

Clusters included in this Subclass
CLUSTER: HA.1.28