Information on SUBCLASS 1.6.3 |
Subclass Accession number: 4496
Subclass: 1.6.3 ![]() Type: HH alpha-alpha DB: ArchDB95 Image coordinates: ![]() ![]() Consensus coordinates: ![]() ![]() Conserved Annotation EC : - (>75 %) SCOP : 51734 (>75 %) 51735 (>75 %) 51736 (>75 %) |
Number of loops: 2 Average sequence ID (%) : 9.1 +/- 0.0 Average RMSD (Å) : 0.900 +/- 0.000 Consensus geometry
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Consensus Sequence: | XhXph |
(φψ)-conformation: | a_aaa |
Pattern: | [Y] | [EY] | [AY] | [CN] | [IM] | [SV] | [EN] | [PY] | [LY] | [AR] | [MP] | [QS] | [GT] | [LV] | [KY] | [AW] | [GI] | [EL] | [T] | [LV] | [MV] | [DG] |
Conservation: | 3.412 | -0.277 | -0.461 | -0.092 | 0.277 | -1.014 | 0.277 | -0.277 | -0.092 | -0.461 | -0.277 | -0.092 | -0.461 | 0.092 | -0.277 | -0.092 | -1.383 | -1.199 | 1.936 | 0.092 | 0.277 | 0.092 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dce_B_37 | 1dce | B | 37 | 58 | YEYCMSEYLRMSGVYWGLTVMD | HHHHHTGGGHHHHHHHHHHHHH | eaaaaaaaaaaaaaaaaaaaaa |
1e5d_A_183 | 1e5d | A | 193 | 214 | YYANIVNPYAPQTLKAIETLVG | HHHHHTGGGHHHHHHHHHHHHH | aaaaNaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dce_B_37 | 1dce | B | FMEN-FORMYLMETHIONINE | L - 45 |
1dce_B_37 | 1dce | B | FMEN-FORMYLMETHIONINE | W - 52 |
1e5d_A_183 | 1e5d | A | FEOMU-OXO-DIIRON | Y - 193 |
1e5d_A_183 | 1e5d | A | OXYOXYGEN MOLECULE | Y - 193 |
1e5d_A_183 | 1e5d | A | FMNFLAVIN MONONUCLEOTIDE | N - 196 |
1e5d_A_183 | 1e5d | A | FMNFLAVIN MONONUCLEOTIDE | I - 197 |
1e5d_A_183 | 1e5d | A | FEOMU-OXO-DIIRON | I - 197 |
1e5d_A_183 | 1e5d | A | OXYOXYGEN MOLECULE | I - 197 |
1e5d_A_183 | 1e5d | A | FMNFLAVIN MONONUCLEOTIDE | Y - 201 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e5d_A_183 | 1e5d | A | FMBFMN BINDING SITE FOR CHAIN B | I - 197 |
Clusters included in this Subclass |
CLUSTER: HH.5.50 |