Information on SUBCLASS 7.1.1 |
Subclass Accession number: 1962
Subclass: 7.1.1 Type: AR beta-beta link DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4.21 (>50 %) GO : GO:0004252 (>75 %) GO:0008236 (>75 %) SCOP : 48726 (>75 %) 48727 (>75 %) 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) |
Number of loops: 19 Average sequence ID (%) : 34.4 +/- 23.8 Average RMSD (Å) : 0.437 +/- 0.130 Consensus geometry
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Consensus Sequence: | hpchphpDXGX |
(φψ)-conformation: | bblpbaaapeb |
Pattern: | [ILMV] | [hnqrsty] | [FILMV] | [dehkqrsty] | [ADGKNS] | [AILTV] | [dknqrst] | x | [DEGNST] | [AD] | [aeknst] | [ADG] | x | [FRY] | x | [CFM] | x |
Conservation: | 0.759 | -0.883 | 0.439 | -0.892 | -0.056 | -0.155 | -0.608 | -1.107 | -0.118 | 1.609 | -0.472 | 0.982 | -0.791 | 1.699 | -1.087 | 1.628 | -0.948 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ccz_A_62 | 1ccz | A | 62 | 78 | LTIYNLTSSDEDEYEME | EEE-S--GGG-EEEEEE | bbbblpbaaaxexbbbb |
1cdy_*_69 | 1cdy | - | 69 | 85 | LIIKNLKIEDSDTYICE | EEE-S--GGG-EEEEEE | bbbblxbaaaxebbbbb |
1cs6_A_264 | 1cs6 | A | 265 | 281 | LHIQNVDFEDEGTYECE | EEE-S--GGG-EEEEEE | bbbxlxbaaaxebbbbb |
1cs6_A_353 | 1cs6 | A | 354 | 370 | LRFSKLVLEDSGMYQCV | EEESS--GGG-EEEEEE | bbxbvpbaaapexbbbb |
1eaj_A_105 | 1eaj | A | 105 | 121 | INVTNLQLSDIGTYQCK | EEE-S--GGG-EEEEEE | bbbxlpbaaaxebbbbb |
1epf_A_155 | 1epf | A | 155 | 171 | LQIRGIKKTDEGTYRCE | EEETT--GGG-EEEEEE | bbbxlpbaaaxexbbxb |
1epf_A_59 | 1epf | A | 62 | 78 | LTIYNANIDDAGIYKCV | EEE-S--GGG-EEEEEE | bbbxlpbaaaxexxbbb |
1f2q_A_52 | 1f2q | A | 53 | 69 | LNIVNAKFEDSGEYKCQ | EEE-S--GGG-EEEEEE | bbbblpbaaaxexbbbb |
1gl4_B_1823 | 1gl4 | B | 1824 | 1840 | LTIRNVQPSDAGTYVCT | EEE-S--GGG-EEEEEE | bbbblpbaaapexbbbb |
1gsm_A_54 | 1gsm | A | 57 | 73 | LTVRNASLSAAGTRVCV | EEE-S--GGG-EEEEEE | xbbblpbaaaxexbbxb |
1hkf_A_73 | 1hkf | A | 76 | 92 | VTMTDLREEDSGHYWCR | EEE-S--GGG-EEEEEE | xbbblpbaaaxexbbxb |
1iil_E_215 | 1iil | E | 216 | 232 | LIMESVVPSDKGNYTCV | EEE-S--GGG-EEEEEE | bbbxlxbaaapebbbbb |
1iil_E_326 | 1iil | E | 327 | 343 | LYIRNVTFEDAGEYTCL | EEE-S--GGG-EEEEEE | bbbblpbaaaxexbbbb |
1kxv_C_77 | 1kxv | C | 80 | 96 | LQMDSLKPDDTAMYYCK | EEE-S--GGG-EEEEEE | bxbblxbaaapexxbxb |
1neu_*_83 | 1neu | - | 83 | 99 | IVIHNLDYSDNGTFTCD | EEE-S--GGG-EEEEEE | bbbxlpbaaapebbbbb |
1nko_A_108 | 1nko | A | 108 | 124 | LSIRDARMSDAGRYFFR | EEE-S--GGG-EEEEEE | bbbblpbaaaxebbbxb |
1npu_A_72 | 1npu | A | 75 | 91 | MNILDTRRNDSGIYLCG | EEE-S--GGG-EEEEEE | bxxxlxbaaapebbbbb |
1oga_D_72 | 1oga | D | 75 | 91 | LHITAAQPGDTGLYLCA | EEESS--GGG-EEEEEE | bbbxlpbaaapexbbbb |
1qfo_A_81 | 1qfo | A | 81 | 97 | LLLKDLKPEDSGTYNFR | EEE-S--GGG-EEEEEE | bbbblpbaaaxebbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ccz_A_62 | 1ccz | A | NAGN-ACETYL-D-GLUCOSAMINE | Y - 65 |
1ccz_A_62 | 1ccz | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 66 |
1ccz_A_62 | 1ccz | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 68 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | V - 56 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 57 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | F - 60 |
1f2q_A_52 | 1f2q | A | MANALPHA-D-MANNOSE | F - 60 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 61 |
1f2q_A_52 | 1f2q | A | MANALPHA-D-MANNOSE | E - 61 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 62 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | S - 63 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | G - 64 |
1f2q_A_52 | 1f2q | A | NAGN-ACETYL-D-GLUCOSAMINE | E - 65 |
1gl4_B_1823 | 1gl4 | B | EPE4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID | V - 1838 |
1qfo_A_81 | 1qfo | A | SIAO-SIALIC ACID | R - 97 |
1qfo_A_81 | 1qfo | A | GALD-GALACTOSE | R - 97 |
Clusters included in this Subclass |
CLUSTER: AR.7.0 |