Information on SUBCLASS 6.26.1 |
Subclass Accession number: 1491
Subclass: 6.26.1 Type: EH beta-alpha DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.2 (>75 %) 3.2.2 (>75 %) 3.2.2.225.3 (>50 %) 5.3.1 (>50 %) 5.3.1.1 GO : GO:0003677 (>75 %) GO:0003702 (>75 %) GO:0004807 (>50 %) GO:0016798 (>75 %) GO:0016799 (>75 %) GO:0016853 (>50 %) GO:0016860 (>50 %) GO:0016861 (>50 %) GO:0030597 (>75 %) SCOP : 51351 (>50 %) 51352 (>50 %) 55944 (>75 %) 55945 (>75 %) 55946 (>75 %) 56370 (>75 %) 56371 (>75 %) 56372 (>75 %) |
Number of loops: 4 Average sequence ID (%) : 11.4 +/- 13.8 Average RMSD (Å) : 1.475 +/- 0.171 Consensus geometry
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Consensus Sequence: | hhXhcpXpXX |
(φψ)-conformation: | bbpaabpbaa |
Pattern: | [AFLT] | [FGIY] | [ITVY] | [ILY] | x | [LPV] | [ADG] | [ENS] | [EPT] | [DQST] | x | [GRS] | x | [GIY] | x | [EQST] | [AFL] | [GLV] | [DENY] | x | [ILV] | [RS] |
Conservation: | -1.019 | -1.019 | -0.223 | 1.160 | 0.119 | -0.119 | 0.251 | 1.571 | 0.756 | -0.046 | -0.842 | -0.049 | -0.591 | -0.676 | -0.665 | 0.219 | 0.119 | -1.054 | -0.223 | -1.726 | 2.071 | 1.987 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1d6a_A_3 | 1d6a | A | 3 | 24 | TIIYNVGSTTISKYATFLNDLR | EEEEESSS--HHHHHHHHHHHH | bbbbxaabbbaaaaaaaaaaaa |
1f8y_A_81 | 1f8y | A | 83 | 104 | LGVYIPDEEDVGLGMELGYALS | EEE--GGG--HHHHHHHHHHHH | bbxbbaabxbaaaaaaaaaaaa |
1k7j_A_3 | 1k7j | A | 4 | 25 | FFYIHPDNPQQRLINQAVEIVR | EEE--SSS--HHHHHHHHHHHH | bbxbpaabpxaaaaaaaaaaaa |
1lp8_A_3 | 1lp8 | A | 3 | 24 | AYTLNLANPSASQYSSFLDQIR | EEEEE-SS--HHHHHHHHHHHH | bbbbxaabwbaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | M - 82 |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | D - 92 |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | V - 93 |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | G - 94 |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | L - 95 |
1f8y_A_81 | 1f8y | A | 5MD5-METHYL-2'-DEOXYPSEUDOURIDINE | E - 98 |
1k7j_A_3 | 1k7j | A | MSESELENOMETHIONINE | Q - 3 |
1k7j_A_3 | 1k7j | A | MSESELENOMETHIONINE | V - 24 |
Clusters included in this Subclass |
CLUSTER: EH.6.106 |