Information on SUBCLASS 5.2.1 |
Subclass Accession number: 7927
Subclass: 5.2.1 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 28 Average sequence ID (%) : 14.8 +/- 16.7 Average RMSD (Å) : 0.443 +/- 0.160 Consensus geometry
|
Consensus Sequence: | XXpXpXpXh |
(φψ)-conformation: | bbpaalabb |
Pattern: | x | [afiklmtv] | [cdnqsty] | x | [denqst] | [egkqrs] | [adekqrst] | x | [afilmtv] | [acfgilvwy] |
Conservation: | -1.145 | -0.381 | 0.036 | -0.805 | 2.312 | 0.517 | 0.615 | -0.802 | 0.144 | -0.490 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bf2_*_8 | 1bf2 | - | 10 | 19 | SYDAQQANIT | EE-TTSSEEE | bxxaalabbb |
1bo1_B_139 | 1bo1 | B | 140 | 149 | LTTYDRRFVI | EE-TTSSEEE | bbpaaUabbb |
1cjx_A_198 | 1cjx | A | 204 | 213 | MSAPDGMIRI | EE-TTSS-EE | xbxaavaxbb |
1dl2_A_414 | 1dl2 | A | 414 | 423 | WRSSVGDFFV | EE-SSSSEEE | xbxaavabbb |
1f1s_A_745 | 1f1s | A | 752 | 761 | FTNWDRTLTA | EE-TTSSEEE | xbxaavabbb |
1f6w_A_66 | 1f6w | A | 66 | 75 | QATITQDSTY | EE-TTSSSEE | bxxaalabbb |
1fwx_A_190 | 1fwx | A | 191 | 200 | DADYEGKWAF | EE-SSSSEEE | bbxaavabbb |
1fwx_A_272 | 1fwx | A | 273 | 282 | NMAPDKKHLC | EE-TTSSEEE | bxxaavabbb |
1gpr_*_58 | 1gpr | - | 62 | 71 | NVFPTKHAIG | EE-TTSSEEE | bbpaavabbb |
1h2w_A_125 | 1h2w | A | 131 | 140 | AFSEDGEYFA | EE-TTSSEEE | bxxaavabbb |
1h2w_A_176 | 1h2w | A | 177 | 186 | AWTHDGKGMF | EE-TTSSEEE | bxxaavabbx |
1h2w_A_235 | 1h2w | A | 239 | 248 | ELSDDGRYVL | EE-TTS-EEE | bxxaavabxb |
1ji1_A_64 | 1ji1 | A | 67 | 76 | SNDPTGTFDY | EE-TTSSEEE | bbxaavabbb |
1jz7_A_224 | 1jz7 | A | 230 | 239 | RFNDDFSRAV | EE-TTSSEEE | bbxaavabbb |
1k32_A_407 | 1k32 | A | 411 | 420 | GVDRNGKFAV | EE-TTSSEEE | bbxaavabbb |
1k32_A_500 | 1k32 | A | 504 | 513 | AFDADSKNLY | EE-TTS-EEE | bxxaalabbb |
1k32_A_80 | 1k32 | A | 85 | 94 | RFFPDGRKIA | EE-TTSSEEE | bxxaavabbx |
1lwd_A_291 | 1lwd | A | 295 | 304 | LVCPDGKTIE | EE-TTSS-EE | xbxaavaxbb |
1mai_*_37 | 1mai | - | 43 | 52 | KLQEDCKTIW | EE-TTSSEEE | bxxaalabbx |
1n6a_A_141 | 1n6a | A | 146 | 155 | YVYPDERTAL | EE-TTSSEEE | bbxaalaxbb |
1n7o_A_651 | 1n7o | A | 657 | 666 | FTNWNQTLTA | EE-TTSSEEE | xbxaalabbb |
1pfq_A_104 | 1pfq | A | 106 | 115 | SISPDGQFIL | EE-TTSSEEE | bxpaavabbb |
1qks_A_199 | 1qks | A | 203 | 212 | RLSASGRYLF | EE-TTS-EEE | bbxaavabbb |
1qks_A_344 | 1qks | A | 348 | 357 | GLDGSHRYFI | EE-TTS-EEE | bxxaavabxb |
1qks_A_504 | 1qks | A | 509 | 518 | EFNKDGTEVW | EE-TTSSEEE | bxxaavabbb |
1umw_A_441 | 1umw | A | 443 | 452 | ILYNDGDSLQ | EE-TTSSEEE | bbxaavaxbb |
2bbk_H_129 | 2bbk | H | 130 | 139 | SLTPDGKTLL | EE-TTSSEEE | bbxaavabbb |
2bc2_A_8 | 2bc2 | A | 9 | 18 | IKNETGTISI | EE-TTSSEEE | bbxaavabbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.4.12 |
CLUSTER: HA.5.8 |