Information on SUBCLASS 2.1.8 |
Subclass Accession number: 5328
Subclass: 2.1.8 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 10.2 +/- 13.0 Average RMSD (Å) : 0.750 +/- 0.140 Consensus geometry
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Consensus Sequence: | XXcXXh |
(φψ)-conformation: | aalpbb |
Pattern: | x | x | x | x | x | [GKNQ] | x | x | [AFGIPVY] | x |
Conservation: | -0.447 | -0.514 | -0.621 | -0.518 | -0.400 | 2.645 | -0.576 | -0.074 | 0.614 | -0.109 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5e_A_8 | 1b5e | A | 17 | 26 | LALKEKDFVV | HHHHTT--EE | aaaaalxxbx |
1cqk_A_75 | 1cqk | A | 76 | 85 | SNWEAGNTFT | HHHHTT--EE | aaaaavxxbb |
1fp5_A_407 | 1fp5 | A | 408 | 417 | RDWIEGETYQ | HHHHTT--EE | aaaaagpbbb |
1j7n_A_612 | 1j7n | A | 621 | 630 | YLVDGNGRFV | HHHHTT--EE | aaaaalxbbx |
1jnr_A_274 | 1jnr | A | 276 | 285 | WFLFFKCKAK | HHHTS---EE | aaaaalxbbb |
1kfw_A_149 | 1kfw | A | 161 | 170 | DLYIKGNLPN | HHHTS--EEE | aaaaavxbxx |
1kv7_A_148 | 1kv7 | A | 150 | 159 | RQVAMGLAGL | HHHHTT--EE | aaaaagxbbb |
1l6x_A_310 | 1l6x | A | 311 | 320 | QDWLNGKEYK | HHHHTT--EE | aaaaavxxbb |
1l6x_A_414 | 1l6x | A | 415 | 424 | SRWQQGNVFS | HHHHTT--EE | aaaaavxxbb |
1lzj_A_102 | 1lzj | A | 108 | 117 | QFRLQNTTIG | HHHHTT-EEE | aaaaalxbbx |
1p1j_A_76 | 1p1j | A | 86 | 95 | LANKHNVEFQ | HHHHTT--EE | aaaaalxxbx |
1r0w_A_430 | 1r0w | A | 432 | 441 | HLCLVGNPVL | HHHHTT-EEE | aaaaavxxab |
1sc0_A_20 | 1sc0 | A | 20 | 29 | AVSHLGIEIS | HHHHTT--EE | aaaaavxbxa |
1umh_A_195 | 1umh | A | 197 | 206 | LLDTTQPAIV | HHHHT--EEE | aaaaalxpbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kfw_A_149 | 1kfw | A | GOLGLYCEROL | K - 154 |
1kfw_A_149 | 1kfw | A | GOLGLYCEROL | Y - 163 |
1lzj_A_102 | 1lzj | A | HGMERCURY (II) ION | T - 119 |
1lzj_A_102 | 1lzj | A | HGMERCURY (II) ION | V - 120 |
1lzj_A_102 | 1lzj | A | UDPURIDINE-5'-DIPHOSPHATE | V - 120 |
1lzj_A_102 | 1lzj | A | HGMERCURY (II) ION | F - 121 |
1lzj_A_102 | 1lzj | A | UDPURIDINE-5'-DIPHOSPHATE | F - 121 |
1lzj_A_102 | 1lzj | A | UDPURIDINE-5'-DIPHOSPHATE | A - 122 |
1p1j_A_76 | 1p1j | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | N - 76 |
1p1j_A_76 | 1p1j | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | N - 77 |
1p1j_A_76 | 1p1j | A | NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE | G - 78 |
1sc0_A_20 | 1sc0 | A | MSESELENOMETHIONINE | L - 24 |
1sc0_A_20 | 1sc0 | A | MSESELENOMETHIONINE | G - 25 |
1sc0_A_20 | 1sc0 | A | MSESELENOMETHIONINE | I - 26 |
1sc0_A_20 | 1sc0 | A | MSESELENOMETHIONINE | E - 27 |
Clusters included in this Subclass |
CLUSTER: HE.3.44 |
CLUSTER: HE.4.60 |