Information on SUBCLASS 5.11.3 |
Subclass Accession number: 5777
Subclass: 5.11.3 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation GO : GO:0004872 (>50 %) GO:0004888 (>50 %) GO:0045012 (>50 %) SCOP : 48725 (>75 %) 48726 (>75 %) 48942 (>75 %) 54451 (>75 %) 54452 (>75 %) 54453 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 57.9 +/- 0.6 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | LpRXXpPpV |
(φψ)-conformation: | aapbbppbb |
Pattern: | [LP] | [E] | [LT] | [HRS] | [T] | [ST] | [L] | [QR] | [R] | x | x | [EQ] | [P] | [NT] | [V] | [ATV] | [I] | [S] | [LP] |
Conservation: | -1.079 | 1.109 | -0.813 | -1.015 | 1.109 | -0.248 | 0.512 | -0.083 | 1.109 | -1.142 | -1.111 | 0.215 | 2.304 | -0.216 | 0.512 | -1.015 | 0.512 | 0.512 | -1.171 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1muj_B_85 | 1muj | B | 85 | 103 | PETHTSLRRLEQPNVVISL | HHHHTGGG--B--EEEEEE | aaaaaaaaxbbxpxbbbbx |
1s9v_B_79 | 1s9v | B | 85 | 103 | LELRTTLQRRVEPTVTISP | HHHTTGGG--B--EEEEEE | aaaaaaaapbbxxbbbbbx |
2iad_B_86 | 2iad | B | 86 | 104 | PETSTSLRRLEQPNVAISL | HHHHTGGG--B--EEEEEE | aaaaaaaaxbbxxbbbbbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1s9v_B_79 | 1s9v | B | EDO1,2-ETHANEDIOL | N - 82 |
1s9v_B_79 | 1s9v | B | EDO1,2-ETHANEDIOL | L - 85 |
1s9v_B_79 | 1s9v | B | EDO1,2-ETHANEDIOL | E - 86 |
1s9v_B_79 | 1s9v | B | EDO1,2-ETHANEDIOL | T - 89 |
1s9v_B_79 | 1s9v | B | EDO1,2-ETHANEDIOL | T - 90 |
Clusters included in this Subclass |
CLUSTER: HE.9.65 |