Information on SUBCLASS 2.7.2 |
Subclass Accession number: 4627
Subclass: 2.7.2 Type: HH alpha-alpha DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 16.5 +/- 16.8 Average RMSD (Å) : 0.580 +/- 0.239 Consensus geometry
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Consensus Sequence: | ppXPXp |
(φψ)-conformation: | aapwaa |
Pattern: | x | [art] | [ael] | [ILY] | [EKPQR] | [enrs] | [lt] | [P] | x | [DKPS] | [EKL] | x | x | [alt] | x | [adgt] | [eky] |
Conservation: | -0.671 | -0.275 | -0.318 | 0.540 | 0.175 | -0.478 | -0.048 | 3.654 | 0.271 | 0.049 | -0.247 | -0.300 | -0.334 | -0.329 | -0.574 | -0.744 | -0.370 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a62_*_3 | 1a62 | - | 3 | 19 | LTELKNTPVSELITLGE | HHHHHTS-HHHHHHHHH | aaaaaaxwaaaaaaaaa |
1ezv_F_54 | 1ezv | F | 57 | 73 | QTALRRLPEDESYARAY | HHHHHHS-HHHHHHHHH | aaaaaapwaaaaaaaaa |
1k1x_A_179 | 1k1x | A | 182 | 198 | RYLIPFRPVKKTIEYLE | HHHTTTS-HHHHHHHHH | aaabwaxwaaaaaaaaa |
1oih_A_140 | 1oih | A | 141 | 157 | AAAYQELPEPLRELADK | HHHHHTS-HHHHHHHHH | aaaaaaxwaaaaaaaaa |
1or7_A_124 | 1or7 | A | 132 | 148 | FRTIESLPEDLRMAITL | HHHHHHS-HHHHHHHHH | aaaaaaxwaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | L - 3 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | E - 5 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | L - 6 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | V - 11 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | T - 16 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | L - 17 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | G - 18 |
1a62_*_3 | 1a62 | * | MSESELENOMETHIONINE | E - 19 |
Clusters included in this Subclass |
CLUSTER: HH.3.205 |
CLUSTER: HH.4.341 |