Information on SUBCLASS 3.5.1 |
Subclass Accession number: 9002
Subclass: 3.5.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 17 Average sequence ID (%) : 15.3 +/- 18.2 Average RMSD (Å) : 0.388 +/- 0.173 Consensus geometry
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Consensus Sequence: | XXXXcXX |
(φψ)-conformation: | aallpaa |
Pattern: | [afiklmv] | [AFGLMVY] | [aekqrt] | x | [chkstwy] | [adegnq] | [gknrs] | [DHNS] | [ailptv] | x | [adknqst] | [acfimtv] |
Conservation: | 0.366 | -0.066 | -0.366 | -0.793 | -0.489 | 0.067 | 0.939 | 2.574 | -0.443 | -1.346 | -0.570 | 0.126 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a5t_*_184 | 1a5t | - | 190 | 201 | ALRLSAGSPGAA | HHHHTTT-HHHH | aaaaavvxaaaa |
1bud_A_16 | 1bud | A | 18 | 29 | MVKKYNGDSDSI | HHHHTTT-HHHH | aaaaalvxaaaa |
1e6y_B_2194 | 1e6y | B | 2197 | 2208 | VAAISNRNAMNA | HHHHTTT-HHHH | aaaaalvxaaaa |
1e94_A_50 | 1e94 | A | 63 | 74 | KLEMHQGHLVKA | HHHTTTT-HHHH | aaaaalvxaaaa |
1g3k_A_50 | 1g3k | A | 63 | 74 | KLEMHQGHLLKS | HHHHTTT-HHHH | aaaaalvxaaaa |
1g3m_A_50 | 1g3m | A | 58 | 69 | YMIYKEGDVEKC | HHHHTTT-HHHH | aaaaalvxaaaa |
1hbn_B_197 | 1hbn | B | 200 | 211 | VVAATLKNTLQA | HHHHTTT-HHHH | aaaaavvxaaaa |
1iag_*_16 | 1iag | - | 18 | 29 | VFMKYNSDLNII | HHHHTTT-HHHH | aaaaallbaaaa |
1j0h_A_428 | 1j0h | A | 428 | 439 | ILTVCGGDIRKV | HHHHTTT-HHHH | aaaaavvxaaaa |
1jfz_A_102 | 1jfz | A | 116 | 127 | VYIDSGRDANFT | HHHHTTS-HHHH | aaaaavlxaaaa |
1ji1_A_476 | 1ji1 | A | 476 | 487 | FATRSGGDLWKT | HHHHTTT-HHHH | aaaaavvxaaaa |
1ji2_A_425 | 1ji2 | A | 425 | 436 | FLTSCGGNEAKF | HHHHTTT-HHHH | aaaaalvxaaaa |
1kcz_A_242 | 1kcz | A | 243 | 254 | IGAAFDVDIKAM | HHHHTTT-HHHH | aaaaallxaaaa |
1m4y_A_50 | 1m4y | A | 63 | 74 | KLREWGGNLTKA | HHHHTTT-HHHH | aaaaalvxaaaa |
1nd1_A_16 | 1nd1 | A | 18 | 29 | IFTKYNSNLNTI | HHHHTTT-HHHH | aaaaallbaaaa |
1njg_A_200 | 1njg | A | 206 | 217 | LARAAEGSLRDA | HHHHHTT-HHHH | aaaaalvxaaaa |
1qsa_A_523 | 1qsa | A | 537 | 548 | VYQQFGNNRIFS | HHHHTTS-HHHH | aaaaavlbaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1e6y_B_2194 | 1e6y | B | OCSCYSTEINESULFONIC ACID | R - 2203 |
1e6y_B_2194 | 1e6y | B | OCSCYSTEINESULFONIC ACID | N - 2204 |
1e6y_B_2194 | 1e6y | B | OCSCYSTEINESULFONIC ACID | A - 2205 |
1e6y_B_2194 | 1e6y | B | OCSCYSTEINESULFONIC ACID | M - 2206 |
1g3m_A_50 | 1g3m | A | A3PADENOSINE-3'-5'-DIPHOSPHATE | T - 50 |
1g3m_A_50 | 1g3m | A | PCQ3,5,3',5'-TETRACHLORO-BIPHENYL-4,4'-DIOL | T - 50 |
1g3m_A_50 | 1g3m | A | A3PADENOSINE-3'-5'-DIPHOSPHATE | T - 51 |
1g3m_A_50 | 1g3m | A | A3PADENOSINE-3'-5'-DIPHOSPHATE | W - 52 |
1hbn_B_197 | 1hbn | B | GOLGLYCEROL | F - 224 |
1jfz_A_102 | 1jfz | A | MNMANGANESE (II) ION | T - 103 |
1jfz_A_102 | 1jfz | A | MNMANGANESE (II) ION | G - 106 |
1jfz_A_102 | 1jfz | A | MNMANGANESE (II) ION | D - 107 |
1jfz_A_102 | 1jfz | A | MNMANGANESE (II) ION | E - 110 |
1qsa_A_523 | 1qsa | A | GOLGLYCEROL | Y - 533 |
1qsa_A_523 | 1qsa | A | GOLGLYCEROL | R - 545 |
1qsa_A_523 | 1qsa | A | GOLGLYCEROL | A - 551 |
1qsa_A_523 | 1qsa | A | GOLGLYCEROL | Y - 552 |
1qsa_A_523 | 1qsa | A | GOLGLYCEROL | N - 553 |
Clusters included in this Subclass |
CLUSTER: HH.3.28 |
CLUSTER: HH.4.129 |
CLUSTER: HH.4.21 |
CLUSTER: HH.5.10 |