Information on SUBCLASS 5.11.1 |
Subclass Accession number: 9115
Subclass: 5.11.1 Type: HH alpha-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 26.8 +/- 24.9 Average RMSD (Å) : 0.487 +/- 0.259 Consensus geometry
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Consensus Sequence: | hhXXXXpXp |
(φψ)-conformation: | aallappaa |
Pattern: | [DEQ] | x | [FHIM] | [fimv] | [ehmqy] | [d] | [ATV] | [LMTV] | [AGIK] | [AG] | [gs] | [ADQR] | x | x | [cgn] | [DET] | [epqr] | [dehkt] | [alv] | [AIVW] | [DEKRT] | [FHIMVY] |
Conservation: | 1.579 | -1.286 | 0.018 | -0.416 | -0.372 | 1.746 | 1.069 | 0.451 | -0.776 | 1.739 | 0.387 | -0.580 | -0.738 | -1.501 | -0.733 | 1.688 | -0.770 | -0.685 | -0.844 | 0.053 | 0.182 | -0.209 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1chu_A_60 | 1chu | A | 64 | 85 | DSHVEDTLIAGAGICDRHAVEF | HHHHHHHHHHTTT---HHHHHH | aaaaaaaaaaalgapxaaaaaa |
1d4d_A_189 | 1d4d | A | 189 | 210 | QIMIDDTMKGGRNINDPELVKV | HHHHHHHHHHTTT-S-HHHHHH | aaaaaaaaaaavUapxaaaaaa |
1e39_A_189 | 1e39 | A | 190 | 211 | ELMFEDTMKGGQNINDPALVKV | HHHHHHHHHHTTT-S-HHHHHH | aaaaaaaaaaavlaxxaaaaaa |
1kf6_A_62 | 1kf6 | A | 63 | 84 | EYHFHDTVAGGDWLCEQDVVDY | HHHHHHHHHHTTT-S-HHHHHH | aaaaaaaaaaalvaxxaaaaaa |
1m4i_A_18 | 1m4i | A | 22 | 43 | QDIRQMVTGAFAGDFTETDWEH | HHHHHHHHHHTTT---HHHHHH | aaaaaaaaaaalvabxaaaaaa |
1nek_A_65 | 1nek | A | 66 | 87 | EWHMYDTVKGSDYIGDQDAIEY | HHHHHHHHHHHTS-S-HHHHHH | aaaaaaaaaaavlabxaaaaaa |
1qla_A_66 | 1qla | A | 67 | 88 | DLHFMDTVKGSDWGCDQKVARM | HHHHHHHHHHTTT-S-HHHHHH | aaaaaaaaaaalvaxxaaaaaa |
1qo8_A_184 | 1qo8 | A | 185 | 206 | EWFIEDAMKGGRQQNDIKLVTI | HHHHHHHHHHTTT-S-HHHHHH | aaaaaaaaaaalvaxxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1kf6_A_62 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | A - 71 |
1kf6_A_62 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | G - 72 |
1kf6_A_62 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | G - 73 |
1kf6_A_62 | 1kf6 | A | 1PEPENTAETHYLENE GLYCOL | D - 74 |
1m4i_A_18 | 1m4i | A | COACOENZYME A | A - 31 |
1m4i_A_18 | 1m4i | A | COACOENZYME A | F - 32 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | F - 32 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | D - 35 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | F - 36 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | T - 37 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | D - 40 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | W - 41 |
1m4i_A_18 | 1m4i | A | KANKANAMYCIN A | H - 43 |
Clusters included in this Subclass |
CLUSTER: HH.5.17 |