Information on SUBCLASS 3.1.6 |
Subclass Accession number: 119
Subclass: 3.1.6 Type: HE alpha-beta DB: ArchDB-KI |
Number of loops: 4 Average sequence ID (%) : 10.2 +/- 0.8 Average RMSD (Å) : 0.70 +/- 0.22 Consensus geometry
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Consensus Sequence: | phXhXXh |
(φψ)-conformation: | aalpabb |
Pattern: | {IPV} | x | {AE} | {ITV} | [EKL] | x | [AGI] | x | {AK} | [FKL] | [DGN] | {AI} | x | x | [AGI] | [GIV] | {LV} | [ACI] |
Conservation: | -1.298 | -1.189 | 0.774 | -0.206 | 0.771 | -0.425 | 0.041 | -0.534 | 0.484 | -0.022 | 2.411 | -0.270 | -0.316 | -1.844 | -0.707 | 0.616 | 0.518 | 1.196 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e0t_A_355 | 1e0t | A | 360 | 377 | RGAVETAEKLDAPLIVVA | HHHHHHHHHTT-SBEEEE | aaaaaaaaaavxabbxbb |
1h72_C_63 | 1h72 | C | 66 | 83 | IVAKKMIDDFNIGKGVKI | HHHHHHHHHTT---EEEE | aaaaaaaaaalxabbbbb |
1kbl_A_543 | 1kbl | A | 543 | 560 | PEDTLNAVKLGAEGIGLC | HHHHHHHHHTT--SEEEE | aaaaaaaaaagxaebabb |
1pfk_A_198 | 1pfk | A | 202 | 219 | VNEIKAGIAKGKKHAIVA | HHHHHHHHHTT-S-EEEE | aaaaaaaaaavxabbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 211 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | G - 212 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 213 |
1pfk_A_198 | 1pfk | A | MGMAGNESIUM ION | K - 213 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | K - 214 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | H - 215 |
1pfk_A_198 | 1pfk | A | MGMAGNESIUM ION | H - 215 |
1pfk_A_198 | 1pfk | A | ADPADENOSINE-5'-DIPHOSPHATE | A - 216 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h72_C_63 | 1h72 | C | TRSTRS BINDING SITE FOR CHAIN C | D - 73 |
1h72_C_63 | 1h72 | C | TRSTRS BINDING SITE FOR CHAIN C | N - 76 |
Bibliographic annotations |
Loop | PDB | Chain | Annotation | Residue |
1h72_C_63 | 1h72 RefS.S.KRISHNA,T.ZHOU,M.DAUGHERTY,A.OSTERMAN,H.ZHANG. STRUCTURAL BASIS FOR THE CATALYSIS AND SUBSTRATE SPECIFICITY OF HOMOSERINE KINASE BIOCHEMISTRY v.40;10810,2001 | C | ATP BINDING RESIDUE | V - 63 |
Clusters included in this Subclass |
CLUSTER: HE.6.7 |