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Information on SUBCLASS 4.39.1
Subclass Accession number: 3971
Subclass: 4.39.1 PSSM
Type: AR beta-beta link
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 14.4 +/- 14.6
Average RMSD (Å) : 0.725 +/- 0.403

Consensus geometry
d (Å): 7 delta (°): 90-135 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hpXppXph
(φψ)-conformation: bbaababb
Pattern: [CFIT][AVWY][AGV][CV]x[LV][NST]x[EQT][DENS][DKNP][EHST][FV][EKT][FLW]
Conservation:-1.143-0.982-0.3911.136-1.4671.6800.890-1.1430.5600.395-0.658-0.6580.664-0.0781.195
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1k5j_A_181k5j   A1832IWGCELNEQNKTFEFEEEEEE-SS--EEEExbbbbbbaababbxx
1kzq_A_171kzq   A1832TAAVILTPTENHFTLEEEEEEBTTB-EEEEbbbbbxbaababbbb
1l6x_A_2581l6x   A261275CVVVDVSHEDPEVKFEEEEEE-SSS---EEbbbbvxxaabaxbbb
1nlq_A_41nlq   A620FYGVTLTAESDSVTWEEEEEE-STT-EEEExbbbbbbaababbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1l6x_A_2581l6x   A     GALD-GALACTOSE E - 258
1l6x_A_2581l6x   A     GALD-GALACTOSE V - 259
1l6x_A_2581l6x   A     NAGN-ACETYL-D-GLUCOSAMINE T - 260
1l6x_A_2581l6x   A     GALD-GALACTOSE T - 260
1l6x_A_2581l6x   A     NAGN-ACETYL-D-GLUCOSAMINE V - 262
1l6x_A_2581l6x   A     NAGN-ACETYL-D-GLUCOSAMINE V - 264
1l6x_A_2581l6x   A     NAGN-ACETYL-D-GLUCOSAMINE D - 265
1nlq_A_41nlq   A     MGMAGNESIUM ION A - 13
1nlq_A_41nlq   A     MGMAGNESIUM ION D - 16

Clusters included in this Subclass
CLUSTER: AR.4.207
CLUSTER: AR.6.145