Information on SUBCLASS 2.2.20 |
Subclass Accession number: 490
Subclass: 2.2.20 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 2 (>75 %) 3.2 (>75 %) GO : GO:0016798 (>75 %) |
Number of loops: 7 Average sequence ID (%) : 9.2 +/- 11.8 Average RMSD (Å) : 0.771 +/- 0.150 Consensus geometry
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Consensus Sequence: | hXpXXX |
(φψ)-conformation: | abaabb |
Pattern: | x | [cvy] | [pqr] | [ITVW] | [DGNST] | [DEKP] | [hnqtw] | [akqt] | x | x | [FILVY] | x | [filvy] | [iltvw] | [aglvy] | x |
Conservation: | -1.012 | 0.357 | 0.602 | 1.231 | 0.956 | 1.700 | -0.628 | 0.229 | -0.831 | -0.646 | 1.521 | -1.415 | 0.361 | -0.442 | -1.012 | -0.973 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ej8_A_100 | 1ej8 | A | 106 | 121 | IVQVGENKTLFDITVN | EEEEETTEEEEEEEEE | bbxabaabbxbxbbbb |
1ji2_A_15 | 1ji2 | A | 15 | 30 | AYPISETQLRVRLRAK | EEEEETTEEEEEEEEE | bbxabaabbxbbbbbp |
1p35_A_11 | 1p35 | A | 18 | 33 | DCQVDKQTRELVYINK | EEEEETTEEEEEEEEE | bbxabaabbbbbbbbb |
1qd6_C_221 | 1qd6 | C | 228 | 243 | SYPITKHVRLYTQVYS | EEEEETTEEEEEEEEE | bbxabaabbxbbbbbb |
1qj8_A_57 | 1qj8 | A | 70 | 85 | AYRINDWASIYGVVGV | EEEEETTEEEEEEEEE | bbxabaabbbbbbbeb |
1szw_A_306 | 1szw | A | 310 | 325 | WNWWDDVTVEIRFWLP | EEEEETTEEEEEEEEE | bbxabaabbbbbbbbx |
2cua_A_71 | 2cua | A | 71 | 86 | VVQTGPNQYTVYVLAF | EEEEETTEEEEEEEEE | xbxabaabbxbxbbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ej8_A_100 | 1ej8 | A | CACALCIUM ION | V - 123 |
1p35_A_11 | 1p35 | A | EDO1,2-ETHANEDIOL | R - 17 |
1p35_A_11 | 1p35 | A | PO4PHOSPHATE ION | R - 17 |
1p35_A_11 | 1p35 | A | EDO1,2-ETHANEDIOL | C - 19 |
1p35_A_11 | 1p35 | A | PO4PHOSPHATE ION | E - 27 |
1qd6_C_221 | 1qd6 | C | HDS1-HEXADECANOSULFONIC ACID | V - 235 |
1qj8_A_57 | 1qj8 | A | PCLPLATINUM(II) DI-CHLORIDE | N - 60 |
1qj8_A_57 | 1qj8 | A | PCLPLATINUM(II) DI-CHLORIDE | Q - 61 |
1qj8_A_57 | 1qj8 | A | PCLPLATINUM(II) DI-CHLORIDE | Y - 62 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | P - 69 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | A - 70 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | Y - 71 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | I - 79 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | Y - 80 |
1qj8_A_57 | 1qj8 | A | C8E(HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE | G - 81 |
1qj8_A_57 | 1qj8 | A | PCLPLATINUM(II) DI-CHLORIDE | F - 90 |
2cua_A_71 | 2cua | A | CUADINUCLEAR COPPER ION | F - 86 |
Clusters included in this Subclass |
CLUSTER: HA.1.27 |