Information on SUBCLASS 2.6.1 |
Subclass Accession number: 5414
Subclass: 2.6.1 Type: HE alpha-beta DB: ArchDB95 Image coordinates: Consensus coordinates: |
Number of loops: 27 Average sequence ID (%) : 10.9 +/- 16.2 Average RMSD (Å) : 0.607 +/- 0.260 Consensus geometry
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Consensus Sequence: | XpXXXX |
(φψ)-conformation: | aabpbb |
Pattern: | x | x | [adeknqrst] | [dehknqrsty] | x | [dehnpqrst] | [cfiltvy] | x |
Conservation: | -0.169 | -0.687 | 0.419 | 0.106 | -0.821 | -0.373 | 2.235 | -0.709 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1akz_*_100 | 1akz | - | 112 | 119 | ERKHYTVY | HHHHS-EE | aaaabxbb |
1e5x_A_247 | 1e5x | A | 251 | 258 | ITAELPIY | HHHHS-EE | aaaabxbx |
1e6c_A_86 | 1e6c | A | 91 | 98 | MRAHGTVV | HHHHHSEE | aaaabxbb |
1ek6_A_70 | 1ek6 | A | 76 | 83 | LFKKYSFM | HHHH--EE | aaaabxba |
1g9m_G_369 | 1g9m | G | 369 | 376 | PEIVTHSF | HHHHTEEE | aaaabxxb |
1iwd_A_117 | 1iwd | A | 123 | 130 | AVASQPVS | HHHHS-EE | aaaabxbx |
1ixk_A_255 | 1ixk | A | 261 | 268 | ALDNFDVE | HHHHSSEE | aaaabxbb |
1j2r_A_183 | 1j2r | A | 183 | 190 | YPRIARVR | HHHHSEEE | aaaabbbb |
1jc9_A_127 | 1jc9 | A | 133 | 140 | LTNQRNYM | HHHHS-EE | aaaabxbb |
1jj2_F_10 | 1jj2 | F | 23 | 30 | ARDTGAVK | HHHHS-EE | aaaabbbb |
1k4k_A_120 | 1k4k | A | 123 | 130 | ILDNAHLI | HHHH-EEE | aaaabxbb |
1khq_A_118 | 1khq | A | 124 | 131 | SIANQPVS | HHHHS-EE | aaaabpbx |
1kwm_A_20 | 1kwm | A | 29 | 36 | LASTTQID | HHHHS-EE | aaaabxbb |
1lau_E_43 | 1lau | E | 55 | 62 | RCQTEEVL | HHHHS-EE | aaaabxxb |
1nnw_A_50 | 1nnw | A | 60 | 67 | LTKKENVK | HHHHS-EE | aaaabxbb |
1o0e_A_116 | 1o0e | A | 122 | 129 | AVAVQPST | HHHHS-EE | aaaabpbx |
1ogc_A_51 | 1ogc | A | 58 | 65 | LAEEMAVE | HHHHS-EE | aaaabxba |
1okb_A_100 | 1okb | A | 112 | 119 | ERSRHTVY | HHHHS-EE | aaaabxbb |
1poi_B_138 | 1poi | B | 141 | 148 | IATYSNTI | HHHHS-EE | aaaabxbb |
1ppo_*_118 | 1ppo | - | 124 | 131 | AIAKQPVS | HHHHS-EE | aaaabpbx |
1qas_A_537 | 1qas | A | 542 | 549 | HNVSCLSR | HHHHS-EE | aaaabxbb |
1qop_B_270 | 1qop | B | 270 | 277 | PLKHGRVG | HHHHSEEE | aaaabbxb |
1ro2_A_124 | 1ro2 | A | 130 | 137 | LCRKTLCT | HHHHS-EE | aaaabxbb |
1uqt_A_187 | 1uqt | A | 197 | 204 | LSNLTRVT | HHHHS-EE | aaaabxbx |
1uyr_A_1702 | 1uyr | A | 1718 | 1725 | AYHDIFTI | HHHHS-EE | aaaabxbb |
1xo1_A_105 | 1xo1 | A | 115 | 122 | CKTTFPTF | HHTTS-EE | aaaabwbb |
2act_*_121 | 2act | - | 127 | 134 | AVTYQPVS | HHHHS-EE | aaaabxbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1okb_A_100 | 1okb | A | AC3CL BINDING SITE FOR CHAIN A | R - 113 |
1uyr_A_1702 | 1uyr | A | AC1D1L BINDING SITE FOR CHAIN A | L - 1705 |
Clusters included in this Subclass |
CLUSTER: HE.1.10 |
CLUSTER: HE.2.17 |
CLUSTER: HE.3.25 |