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Information on SUBCLASS 4.3.3
Subclass Accession number: 6272
Subclass: 4.3.3 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 14

Average sequence ID (%) : 15.5 +/- 16.5
Average RMSD (Å) : 0.393 +/- 0.164

Consensus geometry
d (Å): 5 delta (°): 135-180 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: XXpcGXXh
(φψ)-conformation: bbaagpbb
Pattern: [citvy]xx[aeknqst][DKNST][GQS]xx[filtvwy]x
Conservation:0.095-0.598-0.584-0.1551.1902.321-0.592-0.697-0.220-0.760
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a1x_*_771a1x   -7887YMDNNSRLWQEEETTS-EEEbbxaavxbbx
1b34_A_141b34   A1726IELKNGTQVHEEETT--EEExxxaavpbbx
1d3b_A_171d3b   A2029CETNTGEVYREEETTS-EEEbbxaavxbbb
1d3b_L_161d3b   L1928CILQDGRIFIEEETT--EEEbbxaavxbbb
1fl2_A_3031fl2   A305314IETASGAVLKEEETTS-EEEbxbaagxbbb
1hk9_A_221hk9   A2433IYLVNGIKLQEEETTS-EEEbxxaavxbbb
1jsg_*_251jsg   -2635YLDEKQHAWLEEETT--EEEbbbaavxxbb
1jsg_*_841jsg   -8493YRSSDSSFWREEETTS-EEEbbxaavxbbx
1kq1_A_211kq1   A2433VFFLNGFQMKEEETTS-EEExbxaavxbbb
1m5q_1_231m5q   12635VVLSNGEVYKEEETTS-EEEbxbaavxbbb
1m6i_A_2421m6i   A243252VKLNDGSQITEEETTS-EEEbbxaagpbbx
1n8i_A_3461n8i   A350359IVDTDGSEVFEEETT--EEEbbxaavxxxp
1nar_*_321nar   -4352SYYESGKGTGEE-TTS-EEExbxaavxxav
1ozu_A_831ozu   A8897TADKDGVADVEE-TTS-EEEbxxaavbbxb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3b_A_171d3b   A     GOLGLYCEROL I - 17
1d3b_A_171d3b   A     GOLGLYCEROL V - 18
1d3b_L_161d3b   L     GOLGLYCEROL R - 18
1d3b_A_171d3b   A     GOLGLYCEROL T - 19
1d3b_A_171d3b   A     GOLGLYCEROL T - 22
1d3b_A_171d3b   A     GOLGLYCEROL N - 23
1d3b_A_171d3b   A     GOLGLYCEROL T - 24
1d3b_A_171d3b   A     GOLGLYCEROL E - 26
1d3b_L_161d3b   L     GOLGLYCEROL I - 26
1d3b_L_161d3b   L     GOLGLYCEROL I - 28
1d3b_A_171d3b   A     GOLGLYCEROL R - 29
1m5q_1_231m5q   1     MSESELENOMETHIONINE L - 28
1m5q_1_231m5q   1     GOLGLYCEROL N - 30
1m5q_1_231m5q   1     GOLGLYCEROL E - 32
1m5q_1_231m5q   1     GOLGLYCEROL Y - 34
1m5q_1_231m5q   1     CDCADMIUM ION H - 39
1m5q_1_231m5q   1     GOLGLYCEROL H - 39
1ozu_A_831ozu   A     ZNZINC ION D - 83

Clusters included in this Subclass
CLUSTER: HA.3.79
CLUSTER: HA.4.60