Information on SUBCLASS 25.1.1 |
Subclass Accession number: 6947
Subclass: 25.1.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 82.1 +/- -50.9 Average RMSD (Å) : 0.200 +/- 0.000 Consensus geometry
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Consensus Sequence: | HSYTNDQRhLDLPHKDLRRARAAAXpIIP |
(φψ)-conformation: | bppbaapbabpbwbapaaaappaaabpbw |
Pattern: | [IV] | x | [KRS] | [AG] | [LM] | [LM] | [T] | [T] | [V] | [H] | [S] | [Y] | [T] | [N] | [D] | [Q] | [R] | [ILV] | [L] | [D] | [L] | [P] | [H] | [K] | [D] | [L] | [R] | [R] | [A] | [R] | [A] | [A] | [A] | x | [NS] | [I] | [I] | [P] | [T] |
Conservation: | -0.644 | -2.039 | -1.704 | -1.216 | -0.777 | -0.763 | 0.276 | 0.276 | -0.338 | 2.120 | -0.338 | 1.505 | 0.276 | 0.891 | 0.891 | 0.276 | 0.276 | -1.157 | -0.338 | 0.891 | -0.338 | 1.505 | 2.120 | 0.276 | 0.891 | -0.338 | 0.276 | 0.276 | -0.338 | 0.276 | -0.338 | -0.338 | -0.338 | -2.182 | -0.883 | -0.338 | -0.338 | 1.505 | 0.276 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cer_O_167 | 1cer | O | 167 | 205 | VEKALMTTVHSYTNDQRLLDLPHKDLRRARAAAINIIPT | EEEEEEEEEEE--TTS-SSS---SSTTTTS-TTS--EEE | babbbbbbbbxxbaabxabpbwbabaaaabpaaabbbwb |
1gd1_O_167 | 1gd1 | O | 167 | 205 | IVRGMMTTVHSYTNDQRILDLPHKDLRRARAAAESIIPT | EEEEEEEEEEE--TTSBSSS---SSTTTTSBTTTS-EEE | xabbbbbbxbxxbaaxbabpbwbaxaaaaxpaaabxbwb |
1hdg_O_167 | 1hdg | O | 167 | 205 | IVSGMLTTVHSYTNDQRVLDLPHKDLRRARAAAVNIIPT | EEEEEEEEEEE--TTSBSSS---SSTTTTSBGGG--EEE | babbbbbxxbxxbaaxbabpbpbaxaaaaxpaaabxbxb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | H - 176 |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 179 |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | N - 180 |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 186 |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 187 |
1cer_O_167 | 1cer | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | P - 188 |
1gd1_O_167 | 1gd1 | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | D - 181 |
1gd1_O_167 | 1gd1 | O | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | L - 185 |
Clusters included in this Subclass |
CLUSTER: AR.24.1 |