Information on SUBCLASS 4.1.3 |
Subclass Accession number: 8408
Subclass: 4.1.3 Type: HE alpha-beta DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 14 Average sequence ID (%) : 14.7 +/- 15.6 Average RMSD (Å) : 0.807 +/- 0.334 Consensus geometry
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Consensus Sequence: | XhXhphXh |
(φψ)-conformation: | aabaappb |
Pattern: | [agiltv] | x | x | [AGILV] | x | x | [agiklmv] | x | [adep] | [adeknt] | [aciklv] | x | [CGILVW] | [acfgiklv] | [acdnstv] |
Conservation: | 0.175 | -0.617 | -0.549 | 0.549 | -0.609 | -0.105 | -0.199 | -0.686 | 3.045 | 0.288 | 0.108 | -0.709 | 0.897 | -1.077 | -0.511 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c0d_A_178 | 1c0d | A | 186 | 200 | GNAVLSVNPNLLIFV | HHHHHTT-TTSEEEE | aaaaaaabaaxxbbb |
1fcq_A_146 | 1fcq | A | 169 | 183 | LKAAKRMRPAANWGY | HHHHHHHSTTSEEEE | aaaaaaabaaxbbbx |
1fp1_D_222 | 1fp1 | D | 224 | 238 | LELIISKYPLIKGIN | HHHHHHH-TT-EEEE | aaaaaaabaaxxxbx |
1gpj_A_62 | 1gpj | A | 63 | 77 | EELGDLIHDDAWVKR | HHHHHTT-TT-EEEE | aaaaaaabaapxbbb |
1h7e_A_104 | 1h7e | A | 110 | 124 | LLQGMRDDPALPVAT | HHHHHHH-TT--EEE | aaaaaaabaaxwbbb |
1iib_A_64 | 1iib | A | 64 | 78 | LPEIQRLLPNKPVEV | HHHHHHH-TTS-EEE | aaaaaaabaabwbbx |
1jsc_A_528 | 1jsc | A | 532 | 546 | AIGAQVAKPESLVID | HHHHHHH-TTSEEEE | aaaaaaabaaxxbbb |
1kyz_A_213 | 1kyz | A | 215 | 229 | INTIVSKYPTIKGIN | HHHHHHH-TTSEEEE | aaaaaaabaaxxxbx |
1l6w_A_65 | 1l6w | A | 72 | 86 | ALKLRSIIADIVVKV | HHHHHHHSTT-EEEE | aaaaaaabaaxxxxb |
1luc_A_55 | 1luc | A | 59 | 73 | AAHLLGATETLNVGT | HHHHHHH-SS-EEEE | aaaaaaabaaxxbbb |
1m3u_A_62 | 1m3u | A | 69 | 83 | TAAVRRGAPNCLLLA | HHHHHHH-TTSEEEE | aaaaaaabaaxxbxb |
1mzh_A_144 | 1mzh | A | 144 | 158 | VKLASSIAKKVKVCC | HHHHHHH-SSSEEEE | aaaaaaapaaxxbbb |
1ozh_A_425 | 1ozh | A | 429 | 443 | AIGAWLVNPERKVVS | HHHHHHHSTTSEEEE | aaaaaaabaabxbbb |
1qpo_A_182 | 1qpo | A | 186 | 200 | LRAVRNAAPDLPCEV | HHHHHHH-TTS-EEE | aaaaaaabaabpbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HE.4.63 |
CLUSTER: HE.5.64 |