Logo
Information on SUBCLASS 6.10.2
Subclass Accession number: 8653
Subclass: 6.10.2 PSSM
Type: HE alpha-beta
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 22.2 +/- 32.3
Average RMSD (Å) : 0.467 +/- 0.153

Consensus geometry
d (Å): 11 delta (°): 90-135 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: pXXXpXcXhX
(φψ)-conformation: aapabaapbb
Pattern: [IP][EKR][AE][ACI][IKV][DE][AS][AKQ][PT][DS][DP][DK][FQ][CIV]x[MVW][AY][QR]
Conservation:-1.1010.360-0.349-0.708-1.2432.2240.759-0.8420.4770.8471.0890.471-0.6980.093-1.517-0.575-0.5171.229
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kbi_A_2351kbi   A235252PEEIIEAAPSDKQIQWYQHHHHHHT---SS--EEEEaaaaaaapabaaxxbbbx
1mum_A_1341mum   A141158IRAAVDAKTDPDFVIMARHHHHHHT-SSTTSEEEEEaaaaaaapabaaxbbbxb
1pym_A_1351pym   A142159IKACKDSQTDPDFCIVARHHHHHHT-SSTT-EEEEEaaaaaaaxaxaaxbbbxx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbi_A_2351kbi   A     FMNFLAVIN MONONUCLEOTIDE Q - 252
1kbi_A_2351kbi   A     MPD2-METHYL-2,4-PENTANEDIOL L - 253
1mum_A_1341mum   A     MGMAGNESIUM ION R - 158
1pym_A_1351pym   A     MSESELENOMETHIONINE A - 158
1pym_A_1351pym   A     MSESELENOMETHIONINE R - 159
1pym_A_1351pym   A     OXLOXALATE ION R - 159
1pym_A_1351pym   A     MGMAGNESIUM ION R - 159
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1pym_A_1351pym   A PEPCATALYTIC SITER - 159

Clusters included in this Subclass
CLUSTER: HE.7.131